Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1767 ATGCCGGCCTTATTGCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATCTCTCAGAACATGGGAAGATCTCCTTGCTGTGAGAAAGCACACACCAACAAAGGAGCATGGACGAAAGAAGAAGACGATCGGCTCATCTCCTACATCAGAGCCCACGGCGAAGGCTGCTGGCGTTCCCTCCCCAAAGCCGCCGGCCTCCTCCGCTGCGGCAAAAGCTGCCGCCTCCGCTGGATCAACTACCTCCGTCCCGACCTCAAACGTGGCAACTTCACCGACGAAGAAGACGAGCTCATCATCAAACTCCACAGCCTCCTAGGCAACAAGTGGTCCCTTATTGCTGGAAGGTTGCCCGGAAGAACAGACAATGAGATTAAGAATTACTGGAATACCCACATCAGAAGGAAGCTTCTTAACAGAGGAATCGACCCTTCTACTCACCGCCCTCTCAATGACTCCGCCGCCGCCGCCCACAAAAACCATGAATCCGCCGCCACCATATCCTTCGCCCCTCATGTGAAACAAGAGAGCAGTGATGATGACAACAAGTCAAACGTGTTTATTGAGCTTCATCACAGAGGTTCAAAACGGGGTGTTGCTATAGAACGATGTCCTGACCTGAATCTTGAGCTCACCATTAGTCCTCCTCATCAAAACCAGGAAGCTGAGGATCAAGTTCATCGTCAGCCGATTCTGAAGAGTGGCGGAGGAGATAGAAGCAGAAGCCTTTGTTTTGCTTGTAGTTTGGGTTTGCAGAACAGTAAAGATTGTAGCTGTGGGATTGTTGGCAACATTAATGGCGGCGCTGGTGGGAGTGGTAGTAGCACTGGTGGGTATGATTTCTTGGGGTTGAAAAGTTCTGTTTTGGATTACAGAAGCTTGGAGATGAAATAA 897 0.505 MPALLPLSLSLSLSLSLSISQNMGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTDEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPSTHRPLNDSAAAAHKNHESAATISFAPHVKQESSDDDNKSNVFIELHHRGSKRGVAIERCPDLNLELTISPPHQNQEAEDQVHRQPILKSGGGDRSRSLCFACSLGLQNSKDCSCGIVGNINGGAGGSGSSTGGYDFLGLKSSVLDYRSLEMK 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1767 298 FunFam Myb transcription factor 90 159 - -
Mibi01g1767 298 Gene3D - 90 166 - -
Mibi01g1767 298 ProSiteProfiles Myb-like domain profile. 31 83 IPR001005 -
Mibi01g1767 298 Pfam Myb-like DNA-binding domain 89 133 IPR001005 -
Mibi01g1767 298 Pfam Myb-like DNA-binding domain 36 83 IPR001005 -
Mibi01g1767 298 CDD SANT 38 83 IPR001005 -
Mibi01g1767 298 CDD SANT 91 134 IPR001005 -
Mibi01g1767 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 138 IPR017930 -
Mibi01g1767 298 SMART sant 35 85 IPR001005 -
Mibi01g1767 298 SMART sant 88 136 IPR001005 -
Mibi01g1767 298 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 23 198 - -
Mibi01g1767 298 ProSiteProfiles Myb-like domain profile. 84 134 IPR001005 -
Mibi01g1767 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 83 IPR017930 -
Mibi01g1767 298 Gene3D - 36 88 - -
Mibi01g1767 298 FunFam MYB-related transcription factor 35 88 - -
Mibi01g1767 298 SUPERFAMILY Homeodomain-like 35 130 IPR009057 -
Mibi01g1767 298 MobiDBLite consensus disorder prediction 218 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1767 Mibi-ChrMibi01 25951225 25952325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1767 23 298 MYB Transcription Factor Family AT4G38620 60.068 1.25e-112 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g1767 Myb_DNA-binding 2.5e-14 CL0123