Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1762 ATGACTGTTGAGAGGGGAAATGTGTTGGTGGGGATTGGAATTGATAGCCAAAGCAGGCAGCTTTTAAACTGGGCTCTTGTCAAAGTTGCTCAGCCTGGAGATTGTGTTGTTGCAGTTCATGTGGTCAAATGTCCAGGTCACGTTTCAAAGAACAAACCCCAGCTGGATAAATATTTAGAGGTTTATGATGGCCTATGTGATGTGAAAAAAGTAAGTATCGTAGGTCAAATATTCAAAGGGAGATCCGTTCGAGACATTCTTGTGAGAGAGGCAAAGAATAGTTCTGCTCTTGCTCTAGTGGTTGGTGGTGGTTCTGCCACAGCCAAACACTGTGCTAAACGACTCCCACCCACCACAGATGTTGTAGGTATCCAGGATGGAAGAATTGTCTTCAGAAGGTGTACCAATCTTAAACTACCAGCATCAGGTCTTATACAAGATCCGAGGCCTAGTCTCACAATCATGGACGACAAGGAGTTCCTGTCTGAATTTGGAGACTCCGAGGTTGGCACTGTGAAGTCAATATGTTGTGAGGAGACACAAGATGATGTCCCAGAATTGAATCAAGTATTTGAAAGTGTTAAAGGGGGCAACAAGATGGTGCGTTCAAGAGCAATAACTATGCCTGTAGGTGACCCTTGTGAGAAGAAACTTGGGTGGCCCTTGCTCCGAAGAGTTAATTCAGAGATATCAGAGACACCTCTTGCGAGGAACTTGTCTGTAGTACAATGGGTAATGAGTTTACCAGATCGTTCTCCAAAGAAAAGTTCTTGCTCTTCATCCACAGAGGAAAGTCTCTCAGAAAGAGGCATTAGTGATTCTGAGGATGACAGACAGAAAAATGGTTCCTGTTTTTCATCTTTTGAGCTGCCAAAGGAATTGGAGGGGATTTTTGACTTGAATTCATTTGATTACAAGTGGTTTAACTTTGAGAATCTCAAGTCCTGGACTTCTCAATTCTCTTCAGGAAATCTGATTGGGAAAGGAGGGAGTAACCGTGTGTACAAAGGGATTCTTCCTGATGGAAAACCAATTGCAGTCAAAGTTTTACAGTCATCAAAAGAAGCTTGTAAAGATTTTGCACAGGAAGTGGAAATAATATCCTCTCTGAAGCACAAGTACATAACCCCCTTGCTTGGAATTTGCATTTCAGAAAATGCTTTAGTCTCTGTCTACGAGTTTTTACCCAAAGGAAGCTTAGAGGAAAATTTACACGGTGAGAACAAGGATGGATCCATATTGTCATGGCAAGTGAGATTTAATATTGCTGTTGGTATAGCAGAAGCCCTCAATTACCTTCACAACGAAACTTCAAAGCCTGTTATACACAGAGATGTCAAGTCTTCAAATATTCTCCTCTCCTATGGGTTTGAACCACAATTGACTGATTTTGGACTGGCAATCTGGGGACCAACAAGTTCATATTTTCTGACACAAGAAGATGTAGTAGGAACATTCGGATATCTTGCTCCTGAATATTTCATGTATGGAAAATTAAGTGACAAGATAGATGTGTATGCATTTGGTGTAGTTCTTCTTGAACTAATTTCTGGAAGGAAACCAATCAGTTCCGAGACATGCAAAGGACAACAAAGTTTGGTTGCGTGGGCAAAACCTATGATGGAGAGTGGGAACATTAAGGGTTTATTGGACTCTAATTTAGAGGGGAAATTTGATGAGGTGCAAGTGCAGAGAATGGTTAAGGCTGCAAATCTATGCATTACAAGGGCTGCTAGGCTTCGTCCTAACATGAACCAGATACTGAAGATCCTAGAAGGAGAAGAAAGAGAAGAGATTTTTTTGATGAGGTCATCAAAAGGGTTTGATGATGATGATGATAATACAGAAAACGAGGAGAACATAGACGATGAAGTGTATCCAAATTCAAGTGCAGAGTTACACCTAAGTCTGGCATTGCTTGATGTTAATGATGATGACTCTACATCGTTTACCAGTTGTACAGAGCCTAGCAATAGTGTTTCTTTGGAAGAACTCTTGAAAGAAAGATGGAGCAGATCATCCAGTTTTGATTAG 2034 0.411 MTVERGNVLVGIGIDSQSRQLLNWALVKVAQPGDCVVAVHVVKCPGHVSKNKPQLDKYLEVYDGLCDVKKVSIVGQIFKGRSVRDILVREAKNSSALALVVGGGSATAKHCAKRLPPTTDVVGIQDGRIVFRRCTNLKLPASGLIQDPRPSLTIMDDKEFLSEFGDSEVGTVKSICCEETQDDVPELNQVFESVKGGNKMVRSRAITMPVGDPCEKKLGWPLLRRVNSEISETPLARNLSVVQWVMSLPDRSPKKSSCSSSTEESLSERGISDSEDDRQKNGSCFSSFELPKELEGIFDLNSFDYKWFNFENLKSWTSQFSSGNLIGKGGSNRVYKGILPDGKPIAVKVLQSSKEACKDFAQEVEIISSLKHKYITPLLGICISENALVSVYEFLPKGSLEENLHGENKDGSILSWQVRFNIAVGIAEALNYLHNETSKPVIHRDVKSSNILLSYGFEPQLTDFGLAIWGPTSSYFLTQEDVVGTFGYLAPEYFMYGKLSDKIDVYAFGVVLLELISGRKPISSETCKGQQSLVAWAKPMMESGNIKGLLDSNLEGKFDEVQVQRMVKAANLCITRAARLRPNMNQILKILEGEEREEIFLMRSSKGFDDDDDNTENEENIDDEVYPNSSAELHLSLALLDVNDDDSTSFTSCTEPSNSVSLEELLKERWSRSSSFD 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1762 677 MobiDBLite consensus disorder prediction 250 267 - -
Mibi01g1762 677 Pfam Protein kinase domain 322 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1762 677 PANTHER OS08G0249100 PROTEIN 236 620 - -
Mibi01g1762 677 Gene3D Phosphorylase Kinase; domain 1 293 394 - -
Mibi01g1762 677 ProSiteProfiles Protein kinase domain profile. 320 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1762 677 MobiDBLite consensus disorder prediction 604 627 - -
Mibi01g1762 677 MobiDBLite consensus disorder prediction 250 280 - -
Mibi01g1762 677 SMART serkin_6 320 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1762 677 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 289 394 - -
Mibi01g1762 677 MobiDBLite consensus disorder prediction 611 625 - -
Mibi01g1762 677 CDD USP_Like 7 102 - -
Mibi01g1762 677 FunFam Putative receptor-like serine/threonine-protein kinase 395 607 - -
Mibi01g1762 677 Gene3D Transferase(Phosphotransferase) domain 1 395 605 - -
Mibi01g1762 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Mibi01g1762 677 SUPERFAMILY Protein kinase-like (PK-like) 302 592 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1762 Mibi-ChrMibi01 25859806 25862973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1762 308 594 Trihelix Transcription Factor Family AT1G70460 43.493 1.55e-73 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mibi01g1762 Pkinase 1.7e-41 CL0016