Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1750 ATGTTATGTGTACTTGCTCTGATTAATCTTGTTGAAGGTGACATGAACGTCATCACACAAAGCCTGTCTGAGAGACTGAGGCCCCTTGTGGGTTTGAATGGCTGGGACTACTGTGTTCATTGGAAACTAAGCCAAGACCAAAGGTTTCTTGAATGGATGGGATGCTCTTGTGCTGGGACTGATGGTAGCCAAAATGGTGGAGAATTACTTCTTTTCCCTGTATCTTCATCTACTCCATGCAGAGATACTATGTTTCCTCATCCCAGAACAAAGTCCTGCGATTTACTTTTCCAACTTCCCACTTCCATAACCTTAGATTCTGGGTATAATACATTCATTTTCCCCTGCTTTACTCTGCTTGCAGTTGTAATTTATCAGACCTATATATTATCTCACCTATTGAATCTGTACATGAATAGGATTCATGCAGAGACTCTATTATCCAATCAGCCCAATTGGGTGAACTATTCCACCAGCTTAGACCCAAACACTTTGGAAGAAACAACTGGGACCCAGGTGCAGGAAGATCAACAGGTGGTTGATTTCATCACAGCCCATTGCAATATGGATATGAGCTTTGACATTGACGTGAATTCAAACTGTCTCATGCATCCAAATATGAACCCACTTTTAGGGGATGAGAATGATGGGAATACAATAGCATCAGAGACTTCAAGTCTTCCCCCACATGATCAATGCAATTCACCATTGAACTTGATGCAGCAATATAGCTATGGAAACCAAAATAACAGAGACGGCATTTTTGAAGATTCCCAAGGCTCATTCCTATTGAACAAAAGCCAGCAATTTGGGGAGCCAAATGAGAAGAAAGATCAAGAAGGGGACGATAAAGATTTGATCAAACACTTGGTGGGGAGGTCAGATTCGATGTCGGATTGCAGTGATCAGAACGAAGACGAGGATGATGGGAAGTATAGGCGAAGGAATGGGAAAGGGAATCAATCGAAGAATCTTCTGGCAGAGAGGAGGAGGAGGAAGAAGCTGAATGACAGCTTGTATAATCTTCGGTCTTTGGTTCCCAGAATCTCTAAGCTGGACAGAGCATCGATTCTTGGGGACGCAATTGAGTACGTGAAGGATTTGCAGAAGCAAGCGAAAGATCTGCAAGATGAGCTAGAGGAGCATTCAGAAATGGATGAACAACAAGCACCAGATAATGTTATTGGGGTTGAAATGGGACCAGAAGCAGATCAAATGAAAACCCGAAATGGGTTTCATGTGGGGAAACCAGAGAATGGCAATATCTGGAAGCAAAATCAAGGCTTTGATGCTTCCAACGACAAGCAAACACAACATATGGAGCCGCAAGTGGAAGTGGTAGTGATTGAAGGGAACGAATTGTATGTGAAGGTGTTCTGTGAGCACAGACCTGGTGGATTCGTGAATCTGATGGAAGCATTATATGCTTTGGGGCTTGAAGTCATCCATGCAACAGTCACCAGCCACAAAGGATTTGTCTCCAATGTCTACAAAGTAGAGGTGACCAACAAAGCTTGA 1518 0.4308 MLCVLALINLVEGDMNVITQSLSERLRPLVGLNGWDYCVHWKLSQDQRFLEWMGCSCAGTDGSQNGGELLLFPVSSSTPCRDTMFPHPRTKSCDLLFQLPTSITLDSGYNTFIFPCFTLLAVVIYQTYILSHLLNLYMNRIHAETLLSNQPNWVNYSTSLDPNTLEETTGTQVQEDQQVVDFITAHCNMDMSFDIDVNSNCLMHPNMNPLLGDENDGNTIASETSSLPPHDQCNSPLNLMQQYSYGNQNNRDGIFEDSQGSFLLNKSQQFGEPNEKKDQEGDDKDLIKHLVGRSDSMSDCSDQNEDEDDGKYRRRNGKGNQSKNLLAERRRRKKLNDSLYNLRSLVPRISKLDRASILGDAIEYVKDLQKQAKDLQDELEEHSEMDEQQAPDNVIGVEMGPEADQMKTRNGFHVGKPENGNIWKQNQGFDASNDKQTQHMEPQVEVVVIEGNELYVKVFCEHRPGGFVNLMEALYALGLEVIHATVTSHKGFVSNVYKVEVTNKA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1750 505 Coils Coil 358 388 - -
Mibi01g1750 505 MobiDBLite consensus disorder prediction 213 237 - -
Mibi01g1750 505 MobiDBLite consensus disorder prediction 291 330 - -
Mibi01g1750 505 SMART finulus 325 374 IPR011598 GO:0046983
Mibi01g1750 505 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 172 502 - -
Mibi01g1750 505 Gene3D - 308 384 IPR036638 GO:0046983
Mibi01g1750 505 CDD bHLH_AtAMS_like 322 386 - -
Mibi01g1750 505 Pfam Helix-loop-helix DNA-binding domain 326 369 IPR011598 GO:0046983
Mibi01g1750 505 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 319 368 IPR011598 GO:0046983
Mibi01g1750 505 CDD ACT_UUR-ACR-like 456 499 - -
Mibi01g1750 505 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 321 383 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1750 Mibi-ChrMibi01 25765445 25768568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1750 20 500 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 42.453 3.66e-105 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g1750 HLH 3.3e-11 No_clan