Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1749 ATGTTACGTGTACTTGCTCTGATTAATCCTGTTGAAGGTGACATGAACATCATCACACAGAGCCTGTCTGAGAGACTGAGGCCCCTTGTGGGTTTGAATGGCTGGGACTACTGTGTTCATTGGAAATTAAGCCAAGACCAAAGGTTTCTTGAATGGATGGGATGCTCTTGTGCTGGGACTGATGGTAGCCAAAATGGTGGAGAAGAACTTCTTTTCCCTGTTTCTTCAGCCTCTCCATGCAGAGATACTATGTTTCCTCATCCCAGAGCAAAGTCCTGTGATTTACTTTCCCAACTACCCACTTCCATAACCTTAGATTCTGGGATTCATGCAGAGACACTATTATCCAACCAGCCCAATTGGGTGAACTATTCCACCAGCTTAGACCCAAACACTTTGGAAGAAACAATTGGGACCCAGGTTTTGATTCCTATGCCAGGGGGACTAGTTGAGCTGTTTGTGGCTAAACAAGTGCAGGAAGATCAACAGGTGGTTGATTTCATCACAGCCCATTGCAATATGGATATGAGCTTTGACATTGACGTGAATTCAAACTGTCTCATGCATCCAAATATGAACCCACTTTTAGGGGATGAGAATGATGGGAATACAATAGCATCAGAGACTTCAAGTCTTCCCCCACATGATCAATGCAATTCACCATTGAACTTGATGCAGCAATATAGCTATGGAAACCAAAATAACAGAGACGGCATTTTTGAAGATTCCCAAGGCTCATTCCTATTGAACAAAAGCCAGCAATTTGGGGAGCCAAATGAGAAGAAAGATCAAGAAGGGGACGATAAAGATTTGATCAAACACTTGGTGGGGAGGTCAGATTCGATGTCGGATTGCAGTGATCAGAACGAAGACGAGGATGATGGGAAGTATAGGCGAAGGAATGGGAAAGGGAATCAATCGAAGAATCTTCTGGCAGAGAGGAGGAGGAGGAAGAAGCTGAATGACAGCTTGTATAATCTTCGGTCTTTGGTTCCCAGAATCTCTAAGCTGGACAGAGCATCGATTCTTGGGGACGCAATTGAGTACGTGAAGGATTTGCAGAAGCAAGCGAAAGATCTGCAAGATGAGCTAGAGGAGCATTCAGAAATGGATGAACAACAAGCACCAGATAATGTTATTGGGGTTGAAATGGGACCAGAAGCAGATCAAATGAAAACCCAAAATGGGTTTCATGTGGGGAAATCAGAGAATGGCAATATCTGGAAGCAAAATCAAGGCTTTGATGCTTCCAACGATAAGCAAACACAACATATGGAGCCGCAAGTGGAAGTGGCAGTGATTGAAGGGAACGAATTGTATGTGAAGGTGTTCTGTGAGCACAGACCTGGTGGGTTCGTGAATCTGATGGAAGCATTATATGCTTTGGGGCTTGAAGTCATCCATGCAACAGTCACCAGCCACAAAGGGCTTGCCTCCAATGTTTTCAAAGTAGAGAAGAAGGAGGATGAAATGGTGAAAGCTGAGGAGGTGAGGGAGTCATTGATGGAACTAATGAGGAATCCATGTAGAGGGTGGAATCATGAGATGAGCACAAGTGTAGCATCAGAAGACGGAGTTGCAATGAGAGACTATCATCAGCAAGAGCAACAGCAGCTTCACCTTCATCACAACCACCACATGGCTGCTTATAATAACCCCCACCATTTACACCACATTCATACTTAG 1686 0.4437 MLRVLALINPVEGDMNIITQSLSERLRPLVGLNGWDYCVHWKLSQDQRFLEWMGCSCAGTDGSQNGGEELLFPVSSASPCRDTMFPHPRAKSCDLLSQLPTSITLDSGIHAETLLSNQPNWVNYSTSLDPNTLEETIGTQVLIPMPGGLVELFVAKQVQEDQQVVDFITAHCNMDMSFDIDVNSNCLMHPNMNPLLGDENDGNTIASETSSLPPHDQCNSPLNLMQQYSYGNQNNRDGIFEDSQGSFLLNKSQQFGEPNEKKDQEGDDKDLIKHLVGRSDSMSDCSDQNEDEDDGKYRRRNGKGNQSKNLLAERRRRKKLNDSLYNLRSLVPRISKLDRASILGDAIEYVKDLQKQAKDLQDELEEHSEMDEQQAPDNVIGVEMGPEADQMKTQNGFHVGKSENGNIWKQNQGFDASNDKQTQHMEPQVEVAVIEGNELYVKVFCEHRPGGFVNLMEALYALGLEVIHATVTSHKGLASNVFKVEKKEDEMVKAEEVRESLMELMRNPCRGWNHEMSTSVASEDGVAMRDYHQQEQQQLHLHHNHHMAAYNNPHHLHHIHT 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1749 561 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 306 368 IPR036638 GO:0046983
Mibi01g1749 561 CDD bHLH_AtAMS_like 307 371 - -
Mibi01g1749 561 SUPERFAMILY ACT-like 438 505 IPR045865 -
Mibi01g1749 561 MobiDBLite consensus disorder prediction 276 315 - -
Mibi01g1749 561 Pfam Helix-loop-helix DNA-binding domain 311 354 IPR011598 GO:0046983
Mibi01g1749 561 Coils Coil 484 507 - -
Mibi01g1749 561 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 304 353 IPR011598 GO:0046983
Mibi01g1749 561 CDD ACT_UUR-ACR-like 441 505 - -
Mibi01g1749 561 Coils Coil 343 373 - -
Mibi01g1749 561 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 22 169 IPR025610 -
Mibi01g1749 561 MobiDBLite consensus disorder prediction 198 222 - -
Mibi01g1749 561 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 156 504 - -
Mibi01g1749 561 SMART finulus 310 359 IPR011598 GO:0046983
Mibi01g1749 561 Gene3D - 293 369 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1749 Mibi-ChrMibi01 25759017 25762540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1749 20 518 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 49.060 9.73e-144 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g1749 bHLH-MYC_N 2.8e-19 CL0161