Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1721 ATGGGGGACATACATCTTCCGGGCTTCCGATTTCACCCAACAGAAGAAGAACTCCTTGATTTCTATCTAAAGAACATGATCACAGGCGGCAACAAGATGTGCCTGGACATCATCCACTTCGTCAACATATACCTCCACGATCCCTGGGACTTGCCCTCCATGGCCAACGTGGGTGAACGTGAGTGGTACTTCTTCGTCCCCCGTCATAGAAAACACGGCAGCGGCGGACGCCCCAACCGCACCACCCAGAAAGGCTTCTGGAAGGCCACCGGCTCCGACCGCCACATCCACTCCTCCTTCCCCTCCCAACCCAAGCGTCTCCTCGGTCTCCGTAAGACCCTCGTCTTCTACCAAGGCCGTGCCCCCCGTGGCTCCAAGACCGATTGGGTCATGAATGAGTACCGCCTCCCCGACACCTTCCACTTCCCCAACAAGGACGCAATAGTGTTGTGCAAGATATACCGAAAGGCCACATCTATGAAGGTGTTGGAGCAGAGAGCATCATTGGGTGAGTCTTCTTCTTCCTCCATGCCAATTAGCGTCCAAACCAAGACGGAACAGGAGGAGGAGACGGCGGAGGTGGAAGTGGCGGTGGCGGTGGCGGTGCCGCCTAAGCTGAACCTGCCGGAGCTGCAGTTACCTATGAACATGGGGTGGACACAACAAGACTCATTATGGCCTCAGTTAAACAGCCCTTGGCTCCAATGTTTCACTCCCCTCACCATTTCCAACCTCTTAAATTGTTAA 747 0.5489 MGDIHLPGFRFHPTEEELLDFYLKNMITGGNKMCLDIIHFVNIYLHDPWDLPSMANVGEREWYFFVPRHRKHGSGGRPNRTTQKGFWKATGSDRHIHSSFPSQPKRLLGLRKTLVFYQGRAPRGSKTDWVMNEYRLPDTFHFPNKDAIVLCKIYRKATSMKVLEQRASLGESSSSSMPISVQTKTEQEEETAEVEVAVAVAVPPKLNLPELQLPMNMGWTQQDSLWPQLNSPWLQCFTPLTISNLLNC 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1721 248 ProSiteProfiles NAC domain profile. 5 156 IPR003441 GO:0003677|GO:0006355
Mibi01g1721 248 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Mibi01g1721 248 Gene3D NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
Mibi01g1721 248 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 187 - -
Mibi01g1721 248 SUPERFAMILY NAC domain 6 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1721 Mibi-ChrMibi01 25392545 25393683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1721 3 241 NAC Transcription Factor Family AT2G17040 51.971 3.41e-90 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g1721 NAM 6.3e-35 No_clan