Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1705 ATGGAATATGGTGCGGCCTTAGCACACAATAATTCAGCATTTGAGACCTTATCAGACAGTACTACTACCTCAGTTTCAGAAGTTGGAGACTTCATTGACGACCTCTTTGCAAATGGTTGCTGGCTTGAAACCACTGGAGGATCATCATACAACCTTGCAAATCCCACTTCTCTCATCAATGACTCTAATTTGCACAATTATTGGATGACATCCTCAGAGCCAAATCACCACCACCACCAACAACAAATATATCAACAAGATCAGTCAGAGGGGAGTAATTTTCCATTATTCCAATCTGAGAGCTTTGTGGTTGCAAACACTGAAGTTGGAAAAAGATGGTGGATTGGACCAAAGGCAAATCCAGGCCCATCTTCCTCAGTGAAAGACAGATTAGTTCTTGCCGTGGGATACTTAAGAGAATACACCAAAAACACCAACGTGATTCTTCAGATATGGGTGCCTGCTAGAAGAGAGGATGATCCAAGCTGTAATAATAATAAGAATCTTGAGTATTATTACAGAAATGTTTCCAAAGGTTATAATCATCATCATCAGTTGGCTGGGGAGGAGGAATCTGCAGAAGAGTGTCGAGTAATCCTAGGAAAGTTGCCTGATTCTCATCATCATCATCAGTGGGCCCCACCTGCTAGTGTTAGGTTTTTCAAGAGCCACGAGTATGTTGCTTATGTAAATAGTTATGCACCGCATCATCATAATCAGCAGCACTATGATATGTTGCGTGGATCATTGGCTCTTCCTGTGTTTGAGCGAGGCAGCGGCACATGCCTTGGAGTTGTTGAGATTTTTATGCCTAATCATCACAACAATATCGACTTTCACCCACAGATTGACAATGTCTGCCATTCTCTCCAGACGGTTGATTTTAACAAGAGCACCTGCCAGAACCTTATTTCTCCTCCTGTGAAGGTATATGACGAGTTGTACCTAGCTGCACTAAATGAGATAGTAGAAGTATTAACATCAGTGTGCAAGACGCATAACTTGCCTTTAGCTCTCACTTGGGCACCGTGCGCCCAACAAGGTAAAGCAGGATTATGTCCAAACGAAAACTTCGTAGGTTGTTTGTCCACTGTGGATTCTGCCTGCTATGTGGCAGATCTAGACTTACTTGGCTTCCAAGAAACCTGCTCTGAATACCACCTTCTTAGAGGCCAAGGCAACATTGTTGGAACAGCCTTCACAACCACCAAGCCATGTTTTGCAACCGACATAACTGCCTTCAGCAAGACTGAGTACCCTCTCTCCCACCACGCCGCCATGTTCGGTTTGCGCGCCGCCGTCGCCATCCCCCTCCGAATCGTATACACGGCGACCCCAGCTGATTTCGTGTTGGAGTTTTTCTTGCCCAAGAATTGCCATGACGGAGAAGAACAAAAGCAGATGCTGAATTTGTTGTGTATTGTGGTGCAACAAGCTTGCAGGAGCTTACATGTGGCCATGGATAAACAGATGGAGATAGAAGAAGAAGAAGATTTCACTCTTACAGTTGGTGATATGTTAGCTGCTGCTGCTGCTGCGGCTAATTCATCAAAAGGTGGTGTTGGTGGGGCCCACCATCATAAAGGAGAAACTCTTGAGTTTGGTTCTTGTAATTTAGATGATGCGTCTTCTTCAAAGGAATCATCATGGATTGCACATATGATGGAGGCTCAAACGCAACACAAGGGAAAAGGAGTGTCTGTGTCGTTGGAGTATTTGGAAGAACCTAAACAAGAGTTTAAGGTTACAACCAACTGGGGATTTTGCAATAATAATAGTAATAGTAATAGTAATGGGCAGGCATTTTCAGATTTTGGACAAGTTCAGGTGAACTCATCAGCTGCAGCATCCAGAGGGATGAGTGTAGAGGGTGGTGGAGAATCTTATGCTTTTGGCGGTGGTGGCGGGCGGCGATCGTCGTCCGGTGGGAGAAAGTCCGGCGAGAAGAGACGAACCAAGGCTGAGAAGACTATCAGCTTGCCAGTTCTCCGACAATACTTTGCAGGAAGCCTTAAAGATGCTGCCAAGAGCATTGGTGTGTGTCCGACAACTCTGAAAAGGATATGCAGACAACATGGGATAACAAGATGGCCATCAAGGAAAATAAAGAAGGTAGGACACTCATTAAGGAAACTTCAACTTGTGATAGATTCAGTACAAGGAGCTGAAGGAGCCATTCAGATAGGATCCTTCTACTCAAGTTTCCCAGAATTAAGCTCCACAAATAATTTATCTCCCACCACCACTGGTCCTTCTCATTCCTCCAACATCAGCGAAGACCACTCTAAAAACCCACACAACCCTCACCACCACGCCGCCTTATACAACCACCACCACGGCGGCGCAACCTTAAAATCCCCACCCTCTTGCTGCAGCCAAACTTCCACCATCATCAACGCCGCCATGTCTGGCGGCGGAGATATTTTAATGGCAGAAAACCCAGAAGCCTCACTCATGATGATGAGAACTCATCATGATAATTTGCATGAGGATATGAAGCATCCTAGTGTTGTTGAGGTCTTACCTCAGCCATTGCCTGAAAATAATACTAGTAGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTTTAGGGTGAAGGCTACATTTGGTGATGAGAAAATAAGGTTTAGCTTGCAACCAAATTGGGGGTTTAGAGAATTACAACTTGAGATTGCGAGAAGGTTCAATCTTGAAGATGTGAGCAATATTGGGCTGAAGTATCTAGATGAGGAAGGTGAGTGGGTTCTTTTGACATGTGATGCTGATCTTGAGGAGTCTAAAGATACATATAGATCATCTAAGAGCCGTACAATGAGGTTTGCTTTGTTTCAAGCTTCACCATTGAATCTTGCCAACACTACTTTTGGCAGCAACAGCTCATCCTAA 2883 0.4471 MEYGAALAHNNSAFETLSDSTTTSVSEVGDFIDDLFANGCWLETTGGSSYNLANPTSLINDSNLHNYWMTSSEPNHHHHQQQIYQQDQSEGSNFPLFQSESFVVANTEVGKRWWIGPKANPGPSSSVKDRLVLAVGYLREYTKNTNVILQIWVPARREDDPSCNNNKNLEYYYRNVSKGYNHHHQLAGEEESAEECRVILGKLPDSHHHHQWAPPASVRFFKSHEYVAYVNSYAPHHHNQQHYDMLRGSLALPVFERGSGTCLGVVEIFMPNHHNNIDFHPQIDNVCHSLQTVDFNKSTCQNLISPPVKVYDELYLAALNEIVEVLTSVCKTHNLPLALTWAPCAQQGKAGLCPNENFVGCLSTVDSACYVADLDLLGFQETCSEYHLLRGQGNIVGTAFTTTKPCFATDITAFSKTEYPLSHHAAMFGLRAAVAIPLRIVYTATPADFVLEFFLPKNCHDGEEQKQMLNLLCIVVQQACRSLHVAMDKQMEIEEEEDFTLTVGDMLAAAAAAANSSKGGVGGAHHHKGETLEFGSCNLDDASSSKESSWIAHMMEAQTQHKGKGVSVSLEYLEEPKQEFKVTTNWGFCNNNSNSNSNGQAFSDFGQVQVNSSAAASRGMSVEGGGESYAFGGGGGRRSSSGGRKSGEKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLRKLQLVIDSVQGAEGAIQIGSFYSSFPELSSTNNLSPTTTGPSHSSNISEDHSKNPHNPHHHAALYNHHHGGATLKSPPSCCSQTSTIINAAMSGGGDILMAENPEASLMMMRTHHDNLHEDMKHPSVVEVLPQPLPENNTSSGGGGGGGGGFRVKATFGDEKIRFSLQPNWGFRELQLEIARRFNLEDVSNIGLKYLDEEGEWVLLTCDADLEESKDTYRSSKSRTMRFALFQASPLNLANTTFGSNSSS 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1705 960 ProSiteProfiles PB1 domain profile. 861 944 IPR000270 GO:0005515
Mibi01g1705 960 Gene3D - 861 946 - -
Mibi01g1705 960 ProSiteProfiles RWP-RK domain profile. 644 725 IPR003035 -
Mibi01g1705 960 MobiDBLite consensus disorder prediction 739 789 - -
Mibi01g1705 960 PANTHER PROTEIN NLP8 65 957 IPR045012 GO:0003700
Mibi01g1705 960 SUPERFAMILY CAD & PB1 domains 859 946 - -
Mibi01g1705 960 Pfam RWP-RK domain 658 705 IPR003035 -
Mibi01g1705 960 SMART PB1_new 861 944 IPR000270 GO:0005515
Mibi01g1705 960 Pfam PB1 domain 862 943 IPR000270 GO:0005515
Mibi01g1705 960 MobiDBLite consensus disorder prediction 739 758 - -
Mibi01g1705 960 MobiDBLite consensus disorder prediction 627 654 - -
Mibi01g1705 960 CDD PB1_NLP 862 943 IPR034891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1705 Mibi-ChrMibi01 25256480 25260454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1705 11 956 NLP Transcription Factor Family AT4G35270 41.625 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mibi01g1705 PB1 1.8e-17 CL0072