Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1702 ATGGGAGGTCTGGGTTGTGTGGTGGGAAGTGGTCGGCACCAACGGTTCCTCGTATCTTTTTCTATCCATTATGAGCGCTCTGTACAAACATTGTCCTTTCCATCAACCCTCCATTGTTACACAGACAACAAACCAAGTCTAAATGGCTGCTCTACAAAATGCCAAACAAGCCTTAAGCCTCTTTCTGCACTGCCCAGTAACAAAGATTGCGAGAACTCTGAATCAATCCATACCGAGGAGGATGAAGACATTAATGAAGAAACATTAGAACAGCTAGAATTAAGAGGATGGAGCCTGCTCGCCGGAAATTCTGGAATAATATCCTCGTGCTTTGTTGGCCTTCTCACAGGCGTTGCTGTTGTGCTCTTCAATTATCTAGTTCGTGAAATTCGTGATTTGTTGTGGGATGGGCTTCCCTCTCGAGGGGCCTCGTGGTTAAGAGAAGAGCCAATTCAGGAAACCTGGACTAGGATAATCTCAATACCCGCCTTTGGGGGTTTGAACGTGGCCATGTTGAACCTACTTCTTCAACATATCTCTTCCACTGAGGAAGATCCATTACGTGGCATATCTGCCTATCTCAAGTCTGCTTCTGAACCTATTATAAAGGCTTTGGCAGCTTCTATCACTTTAGGCACAGGGAATTCCTTGGGTCCTGAGGGTCCCAGTGTTAATATTGGTACTTCTGTTGCCAAAGGTGTTGGTTTTTTCTTTGACAAGAGTTCTAGCAGAATGCTATCTCTTTTGGCCGCTGGATCTGCTGCTGGAATCGCTTCTGGTTTCAATGCTGCTGTTGCTGGTTGTTTCTTTGCTGTAGAGTCTGTCTTATGGCCATCACCTGTAGATTCATCTTTATCACTTACAAATACTACATCTATGGTAATACTTAGTGCTGTCATAGCTTCAGTGGTTTCTCAGGTTGGTCTTGGGTCTGAACCTGCCTTCAAAGTTCCGGATTATGACTTTCGTTCAATTAGTGAGCTCCCATTGTATCTATTGCTGGGTATCTTTTGTGGCTTGGTTTCACTGGCCCTATCTAGGTGCACTTCATATATGATAGCATTTGTTGACTATCTTCACAAGGCCACCGGCATACCAAGAACTTTATTTCCTGTATTGGGTGGTTTATCTGTTGGGCTAATAGCACTGGTATATCCTGAAATCCTTTACTGGGGCTTTGAGAATGTTGACACTGTGTTAGAATCTCGGCCATTTATGAAGAGTGTTTCTATTGACCTACTTCTTCAGCTAGTAGCCATTAAGATTGTTGCAACTTCTCTGTGTCGGGCTTCTGGGTTAGTAGGAGGTTATTATGCCCCATCTCTCTTTATTGGTGCAGCCACTGGGATGGCATATGGGAAATCCATTGGTTATATTGTTGCTGAGGTCAATCCTATAATTCATCTGTCTGGTTTGGAATTGGCATCACCCCAAGCTTATGGCCTGGTTGGAATGGCAGCGACTCTCGCAGGAGTATGTCAGGTGCCTCTTACTGCTGTCTTGCTGCTGTTTGAACTGACCCAAGACTATCGGATTGTTCTACCACTTCTTGGAGCTGTAGGCTTGTCTTCATGGATTTCATCTGTAGAGACAAAGAAAGGGAAAGACCGGGGCACAATGGAGCGCAAATTTATAAACTCAGATTCTAGTATTCGTCCAGAAAATTTTCCTAGCAGTTCAATTGAATCATCTACTAATAATTCATATGCTGAAAGTGTGCCTGATGCAAATAAGTTGCCTCAAGTTGAAAGTCTGCTTTGTGTAGAGGATGATATTGTTGAAACTGCATATTTAAGAAGAAAAACATTAGTTTCACAAGCCATGAAGACGAAATTTGTGACAGCGTCAATGGGTACCCGGCTTACAGAAGTATTAAATCTCATGCTCACTGAGAAACAGTCCTGTGCGGTGATTGTTGGTACTGATCAAACTTTAATTGGCTTATTGACACTTAGAGACATTCGAGATAACAGCAAATCTGCCAAGAAAAGAAGCAAAAAACCCAAGGAGCTTGTAGTTTCAGAACTATGCCTTTTAAGAGGTGGAATATGTAGCGTTCCATGGACTGCTACTCCTGATATGGATCTTCTTTCTGCTCAAATGGCAATGAAGAAACATGGAGTCGATCAAGTTCTAGTTGTTGAAAAGCTCAATGACAGGGCATATCCTGTTGGCATATTAGACTGTGAAAGTATCAATTTGACTTGCAGTGCTTTGGCCACTAAAGAATCCCTCTCGTAA 2241 0.4293 MGGLGCVVGSGRHQRFLVSFSIHYERSVQTLSFPSTLHCYTDNKPSLNGCSTKCQTSLKPLSALPSNKDCENSESIHTEEDEDINEETLEQLELRGWSLLAGNSGIISSCFVGLLTGVAVVLFNYLVREIRDLLWDGLPSRGASWLREEPIQETWTRIISIPAFGGLNVAMLNLLLQHISSTEEDPLRGISAYLKSASEPIIKALAASITLGTGNSLGPEGPSVNIGTSVAKGVGFFFDKSSSRMLSLLAAGSAAGIASGFNAAVAGCFFAVESVLWPSPVDSSLSLTNTTSMVILSAVIASVVSQVGLGSEPAFKVPDYDFRSISELPLYLLLGIFCGLVSLALSRCTSYMIAFVDYLHKATGIPRTLFPVLGGLSVGLIALVYPEILYWGFENVDTVLESRPFMKSVSIDLLLQLVAIKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKSIGYIVAEVNPIIHLSGLELASPQAYGLVGMAATLAGVCQVPLTAVLLLFELTQDYRIVLPLLGAVGLSSWISSVETKKGKDRGTMERKFINSDSSIRPENFPSSSIESSTNNSYAESVPDANKLPQVESLLCVEDDIVETAYLRRKTLVSQAMKTKFVTASMGTRLTEVLNLMLTEKQSCAVIVGTDQTLIGLLTLRDIRDNSKSAKKRSKKPKELVVSELCLLRGGICSVPWTATPDMDLLSAQMAMKKHGVDQVLVVEKLNDRAYPVGILDCESINLTCSALATKESLS 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1702 746 PRINTS Chloride channel signature 433 453 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi01g1702 746 PRINTS Chloride channel signature 254 273 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi01g1702 746 PRINTS Chloride channel signature 478 494 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi01g1702 746 PRINTS Chloride channel signature 496 515 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi01g1702 746 PRINTS Chloride channel signature 203 222 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi01g1702 746 MobiDBLite consensus disorder prediction 549 573 - -
Mibi01g1702 746 Gene3D - 589 734 IPR046342 -
Mibi01g1702 746 Gene3D Clc chloride channel 100 549 - -
Mibi01g1702 746 Pfam Voltage gated chloride channel 194 527 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi01g1702 746 SUPERFAMILY Clc chloride channel 106 534 IPR014743 -
Mibi01g1702 746 SMART cbs_1 611 659 IPR000644 -
Mibi01g1702 746 SMART cbs_1 686 737 IPR000644 -
Mibi01g1702 746 ProSiteProfiles CBS domain profile. 608 664 IPR000644 -
Mibi01g1702 746 PANTHER CHLORIDE CHANNEL PROTEIN CLC-E 89 739 - -
Mibi01g1702 746 CDD Voltage_gated_ClC 113 524 - -
Mibi01g1702 746 Pfam CBS domain 604 655 IPR000644 -
Mibi01g1702 746 SUPERFAMILY CBS-domain pair 598 731 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1702 Mibi-ChrMibi01 25170608 25178747 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1702 77 300 Ion Channels AT3G27170 24.809 4.24e-06 48.5