Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1691 ATGATACTTCGTACTTTGCTTTTTCTGGGATTCTTGTCGGTTCAGATTCATTTGATCTTCTCTTTCACTGATCCTCAAGATGTTGCTGTATTAAGATCTTTAAAGGATATTTGGCAAAACACGCCACCCAGTTGGGATAAATCAGATGACCCCTGTGGAGCACCCTGGGAAGGAGTCACTTGCAACAGATCCAGAATCACTTCACTCGGATTGTCAACTATGGGCCTGCAAGGCAAATTGAGTGGAGATATTGGAGGTCTCACTGAATTGAGATCCTTGGACTTGTCGTTTAACAGAGGCTTGAAGGGCCCTCTGTCTCCAAAATTAGGAGACCTAAGAAATCTAAATATATTGATTTTGGCTGGTTGCGGCTTCAGTGGTAAAATTCCCAATGAATTGGGAAATCTCTCAGAGCTATCTTTCTTGGCATTAAATTCAAATAACTTGTCTGGAGAAATACCTGCTTCATTGGGTAATCTTTCCAAATTATATTGGTTAGACTTAGCAGACAATCAATTGACAGGGCCAATTCCTGTCTCCACTTCCACGTCTCCTGGATTAGACATGCTTTTAAAGGCCAAGCACTTCCATTTCAACAAGAACCAGCTTTCAGGTCCCATTCCACCAAACCTTTTCAGCTCTCAGATGGTACTCATTCATGTGTTGTTTGATGGGAATCGTTTAACAGGGTCAATTCCATCAACATTAGGATTAGTTCAAACACTTGAAGTTCTACGGCTTGATAGAAATTTGTTGATTGGTGAAGTCCCGTCAAATTTCAACAACCTAACCAACCTCAATGAATTGAATCTGGCACATAATAAATTGACAGGTTCTTTACCAGATTTGTCTCAGATGGATACCATCAATTACGTTAACAATTCTTTTGATCCTTCTCAACCCCCGTTATGGTTCCAAACTTTACCATCACTTACGACTTTAATTATGGAATTTGGATCACTTGAAGGTCCCTTGCCATCAAAACTCTTCAGCAGTCCCCAAATACAACAAGTGAAATTAAAGCGCAATGCATTGAACAACACTTTGGACATGGGTGACAGCATTAGTCCTCAATTGCAACTTGTAGATTTACAAGACAACCAGATTACTTCAGTAACACTCAGTTCTAGATACAAAAACACTTTGATTTTGATTGGAAATCCAGTGTGCCTTACTGCCCTCTCAAATACCAATTACTGTCAACTCCAACAACAACCTAAAAAGCCTTACTCTACAAGCTTGGCTAATTGTGGGAGCAAATCATGTCCTCCTGATCAGAAGTTAAGCCCACAAAGTTGTGAATGTTCCTACCCATATGAAGGGATTCTATATTTCAGAGGGCCATTGTTTAGAGAATTATCTAATGCAAATACATTTCATTCTCTTGAGATGAGCTTGTGGGTGAAGTTGGGCCTCACTCCTGGTTCAGTATCTCTACAGAACCCATTTTTCAACAGTGATGATTATCTTCAAGTGCAATTAGCACTCTTCCCACCCACAGGAACTTATTTCAATAGGTCAGATATTCAAAGAATTGGATTTCAATTAAGTAATCAAACTTACAAGCCACCCCCAGAGTTTGGACCATATTACTTCATTGCATTTCCTTATGCTTTTCCAGAATCCCGTGGAGCATCTTCTCTAAGCAAGCCTGTGATCATTGGGATAGCAATTGGCTGCTCACTTCTGGTATTGAGCCTCGTAGGGCTAGTGATATATGCCATTATACAAAAGAAACGCGCAGAGAAAGCCATTGTGCTAAGCAGGCCTTTTGCATCATGGACACCTAGTGGGAAGGATAGTGGAGGAGCTCCACAACTAAAAGGAGCAAGATGGTTCTCTTATGATGAACTCAAAAAATGCACCTCAAATTTCTCCCATAACAATGAGTTAGGATTCGGAGGTTATGGCAAGGTGTACAAAGGGGTGCTTCCTGATGGACAAATGGTCGCAATAAAACGTGCCCAACAAGGATCAATGCAAGGAGGACTTGAGTTCAAGACTGAAATTGAATTGCTTTCACGAGTTCATCACAAGAATCTTGTTGCTCTTGTAGGATTCTGCTTTGAACAAGGAGAGCAAATGTTGGTCTATGAATATATGCCCAATGGAACACTCAGGGATTGTTTATCTGGGAGATGTGGGATTTATCTAGACTGGAAGAGGAGGCTAAGAGTTGCTCTTGGGTCAGCAAGAGGACTTGCTTACTTACATGAACTTGCTAACCCTCCCATAATTCATAGAGACGTCAAGTCATCTAATATCTTATTAGATGAGGGTTTCACAGCAAAAGTTGCAGATTTTGGTTTATCAAAGTTAGCATCAGATAGTGGAAAAGGCCATGTTTCTACTCAGGTTAAAGGCACATTGGGATATCTTGATCCTGAATATTACATGACACAACAATTGACTGAGAAGAGTGATGTCTATAGTTTTGGAGTCGTGATGCTTGAACTCATAACTGCAAGGCAGCCTATAGAGAAAGGGAAGTACATTGTGCGTGAAGTGAGAACATTGATAAACAAGAATGATGATCAAGAGTATTGTGGTTTAAGGGAACTAGTGGATCCAGTGGTTATAGAAACTTGTAATCTTGGTGGGTTCCGTACATTCTTGGATCTAACAATGCAATGTGTTGAGGAATCAGCAAATGATCGTCCCACAATGAGTGAAGTTGTGAAAGCACTTGAGATCATTCTGCAAAATGATGGCTTGAACACAAATTCCACTTCTGCTTCTTCTTCTGCAACAGACTTTGCACATTCTAATAAGGCTTCTCTCTCGCATCCTTACATGGATGCTTTCAGCAAAAAGGACACTAATAATGAGACCAATGCCTTTGACTACAGTGGTGGCTACTCACTTCCTGCGAAAATCGAGCCCAAATAG 2889 0.406 MILRTLLFLGFLSVQIHLIFSFTDPQDVAVLRSLKDIWQNTPPSWDKSDDPCGAPWEGVTCNRSRITSLGLSTMGLQGKLSGDIGGLTELRSLDLSFNRGLKGPLSPKLGDLRNLNILILAGCGFSGKIPNELGNLSELSFLALNSNNLSGEIPASLGNLSKLYWLDLADNQLTGPIPVSTSTSPGLDMLLKAKHFHFNKNQLSGPIPPNLFSSQMVLIHVLFDGNRLTGSIPSTLGLVQTLEVLRLDRNLLIGEVPSNFNNLTNLNELNLAHNKLTGSLPDLSQMDTINYVNNSFDPSQPPLWFQTLPSLTTLIMEFGSLEGPLPSKLFSSPQIQQVKLKRNALNNTLDMGDSISPQLQLVDLQDNQITSVTLSSRYKNTLILIGNPVCLTALSNTNYCQLQQQPKKPYSTSLANCGSKSCPPDQKLSPQSCECSYPYEGILYFRGPLFRELSNANTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQVQLALFPPTGTYFNRSDIQRIGFQLSNQTYKPPPEFGPYYFIAFPYAFPESRGASSLSKPVIIGIAIGCSLLVLSLVGLVIYAIIQKKRAEKAIVLSRPFASWTPSGKDSGGAPQLKGARWFSYDELKKCTSNFSHNNELGFGGYGKVYKGVLPDGQMVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVALVGFCFEQGEQMLVYEYMPNGTLRDCLSGRCGIYLDWKRRLRVALGSARGLAYLHELANPPIIHRDVKSSNILLDEGFTAKVADFGLSKLASDSGKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITARQPIEKGKYIVREVRTLINKNDDQEYCGLRELVDPVVIETCNLGGFRTFLDLTMQCVEESANDRPTMSEVVKALEIILQNDGLNTNSTSASSSATDFAHSNKASLSHPYMDAFSKKDTNNETNAFDYSGGYSLPAKIEPK 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1691 962 Gene3D Ribonuclease Inhibitor 294 465 IPR032675 -
Mibi01g1691 962 Gene3D Transferase(Phosphotransferase) domain 1 701 923 - -
Mibi01g1691 962 Gene3D Phosphorylase Kinase; domain 1 599 700 - -
Mibi01g1691 962 FunFam Leucine-rich repeat family protein 26 182 - -
Mibi01g1691 962 Pfam Protein tyrosine and serine/threonine kinase 628 896 IPR001245 GO:0004672|GO:0006468
Mibi01g1691 962 SUPERFAMILY L domain-like 34 400 - -
Mibi01g1691 962 CDD STKc_IRAK 631 899 - -
Mibi01g1691 962 SUPERFAMILY Protein kinase-like (PK-like) 610 914 IPR011009 -
Mibi01g1691 962 Gene3D Ribonuclease Inhibitor 27 182 IPR032675 -
Mibi01g1691 962 FunFam Leucine-rich repeat protein kinase family protein 593 700 - -
Mibi01g1691 962 Gene3D Ribonuclease Inhibitor 183 293 IPR032675 -
Mibi01g1691 962 PANTHER RECEPTOR-LIKE PROTEIN 55 32 900 - -
Mibi01g1691 962 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Mibi01g1691 962 ProSiteProfiles Leucine-rich repeat profile. 265 287 IPR001611 GO:0005515
Mibi01g1691 962 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 701 912 - -
Mibi01g1691 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 745 757 IPR008271 GO:0004672|GO:0006468
Mibi01g1691 962 FunFam Predicted protein 185 403 - -
Mibi01g1691 962 SMART serkin_6 625 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1691 962 ProSiteProfiles Protein kinase domain profile. 625 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1691 962 ProSitePatterns Protein kinases ATP-binding region signature. 631 653 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1691 Mibi-ChrMibi01 25034513 25043939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1691 18 962 Receptor kinase-like Gene Family AT1G79620 72.393 0.0 1424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mibi01g1691 PK_Tyr_Ser-Thr 1.1e-46 CL0016