Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1685 ATGTACCCAAAACGGTCTAACCAAGGTGATGGACCTGGTTCCAGACCAGTCCGCACTAGTGATAGGATCAAGACGAGGCCAAACATTTATGGCCGACCTTACTTGTATTATAGCTCAAAGCGCACCAGGAAAGGCAAGAACAAGACAAGGACAGCAGCTTCACAAATTGCCAAGATGTTGCGGCCAAGGGATCGGCCAGCACAAGATTCAAATGCTTCTAATTCTGCAGCTACCAATCTTCGACGCTCAACTAGGAAAAGAAGGATTTCTGTAAATCTTGAAGGTTTCACTGACAGTTCTGGAGCTGAGGATGAAGACTTGATGAGGCCCACATATCAACAACCGAGAAAGCAGATTGACCAAAGTGTCAGTCAGGATGAGTTGAGGTCTCGGAAGCACAAAAAAGCTGTGGAAACTAAACCAAACCCTCGGCGTGAAGGTCTGCGGCCTCGTCGTTCAAAGTCTGTTGTAAGAGAACCCTTAAATTCAGAATCTGATGATGATCAAGATTATTCAGAAGAGAAGGTTGGACAGGATGAAACAGAAAATGGGAATGATTTGGATGAAAATGATGCAGATGATGGTCAGAATGAGATTGAAGGAGATGCTGAGGGTGAAGATGAAGGGGATGATGAGGATGAGGATGAAGGTGATGATGAGGATGGTGATGGTGATGATGAAGATGGTGAAGAAGAGCAGGATGGAAGAAGACGCTATGATCTTCGAAATCGTGCAGATGTTCGCAGATTCTCAATGGAAGAAGGGAAGGCCCAACCAAGGTCGCCCCGAAGAGTGTTGCATCAAGGTATGGGCTCTAAGGTTGGCAGGGATGTCAGAAAGGGTGGATCAAGAGTTCATAAGCGATATCGTTTAGCAAGACCTGAAGATTCTGATGACTCTATTCTTGTTGATGAACTGGATCAAGGCCCTGCTATTCCATGGGGTCGGGGTGGCAGCAGATCTGGCCCACCTTGGCTTTTTGGTGGACTAGATACGCATGGAACAACAGCATGGGGTTTGAATCTTGCTGCATCCGGCTGGGGTCATCAAGGTGATGCATTAGCTACGTTGACTTCTGGGATTCAATCTGCTGGACCAAGCTCTAAAGGAGGTGCAGATATTCAACCCTTACAGGTTGATGACAGTGTTAGTTTCGATGATATAGGTGGGCTGTCAGAATACATTGATGCTCTGAAGGAAATGGTTTTCTTTCCATTACTGTATCCAGATTTCTTTGCAAGTTATCATATTACCCCACCTAGAGGGGTGTTGTTATGTGGGCCCCCTGGCACGGGCAAAACACTAATTGCGAGAGCTTTGGCTTGTGCTGCATCAAAAGCTGGTCAGAAGGTTAGCTTTTACATGCGCAAGGGAGCAGATGTATTAAGCAAGTGGGTTGGTGAGGCTGAAAGACAATTGAAATTACTCTTTGAGGAAGCTCAAAAGAATCAACCTTCTATTATTTTCTTTGACGAAATAGATGGGCTTGCTCCTGTGAGGTCTAGCAAGCAAGAACAGATTCACAATTCTATCGTGTCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTCTTAATAGGGGCCACCAATAGGATTGATGCTATTGATGGGGCCTTGCGTCGCCCTGGTAGATTTGATCGGGAATTCAACTTTCCCTTGCCTGGTTGTGAGGCACGTGCTGAAATATTGGACATTCATACCCGTAAGTGGAAGCATCCTCCTTCAAAGGAACTGAAAAGTGAGCTTGCTGCAAGTTGTGTAGGATATTGTGGTGCTGACTTAAAGGCTCTCTGTACTGAAGCTGCCATCCGTGCTTTTCGTGAAAAATATCCACAGGTTTATATGAGTGATGACAAATTCTTAATAGATGTCGATTCAGTCAAGGTAGAAAAGTATCACTTTATTGAAGCTATGTCAACAATAACTCCTGCTGCTCATAGGGGTGCAATTGTTCACTCTAGGCCATTGTCTCTAGTTGTTCAACCATGCCTACAAAGACATCTAGAGGAAGCCATGAAATTTATATCTGATATTTTTCCTCCAGTTGCTGTTGCAGCAGAATTGTCCAAACTTTCTATGCTTTCTTATGGTTCTGCTATTCCACTTGTCTATAGACCTAGGCTTCTACTTTGTGGTGGTGAAGGTACTGGGCTGGACCATCTTGGGCCTGCAGTTTTACATGAACTGGAAAAATTTCCTGTTCATTCGTTAGGACTTCCATCTCTCCTGTCGGATCCTAGTGCTAAGACGCCAGAGGAGGCTTTAGTACATATATTTGGTGAAGCTAGAAGAACAACTCCATCTATTCTCTATTTACCGCAATTCAATGTTTGGTGGGAAACTGCACATGAACAGCTCAGGGCTGTTCTCCTGACTTTGCTAGAGGAATTGCCCTCTAACATCCCTATTTTATTGCTCGGAACGTCATCAGTGTCGCACGATGAAGTTGATGAAGTGCCTCCTTCAATTTTTCCTCCCCGTTCAGTCTATAACATGAACTTGCCATCTGCTGAAGATAGAACATCATTTTTCAATTGTTTGGTCGATGCTGCTTTATCAGTCTCATTGGAGAAAACAAGCAAAAAATCCCAAGAAACAGCTCCCCTTCCTGAACTTCCTAAGGCACCTAAATTAGCAGGTGGTGTGAAGGTATCTGAGCTCAAAGCAACTGTTGAAGCTGAGCAGCATGCCCTTCGCAGATTGCGAATGTGCCTTAGAGATATTTGCAACCGGATATTATATGACAAACGATTTGTTGCCTTCCATTATCCTGTATCGGATGAAGATGCTCCTAACTATCGCTCAATAATTCAGAACCCGATGGACATGGCTACTATACTGCAGCATGTTGATAATGGTCATTATATTACATGTTCAGCATTCTTACAGGACATTGATCTTATTGTTTCCAATGCTAAGGCTTATAATGGAGATGACTATAATGGTTCAAGGATTGTCAGTAGAGCTTGTGAACTCCGTGATGCAGTGCATGGAATGCTCTCACAGATGGATCCAGCGCTGGTTGCATACTGCGACAAGATTGCTGCTCAAGGTGGCCCAGTTAATTTGCCTGATGAGCTCAGGGACTCTACATTCCCATCTACTCCTGTTGTTCAGCTGGGAACCACCACTAGAATGAGTGCTCGACTTCGTAATGTCCAACCTGAGGTTAATATGGATAAAAGCTATGAAGCATTGAAGCGGACAAAAAGGAGCACTGATGTTACACATGCAGATGACAAGTCACGACAAGATCCTCTGCCGCCAAAGACTTTACCAGAACAGCAAGCCAGTGAGGTCGCTTGTGAAGGACCTGAACCTGCTTCAATTGATGAAAATCTACATGGAGCTGGTACGTGTGAGCAAGCGGATGATAGTAGCATAGATGTTACCATGTCTGATGGTGAGTTTCCAAGCCAAGTGGAGTCTGTGAAGCAGCTTTTTGTGAAGCGTAGCGAAAATTACAGCATTCCGCAGCTTGAAAGGATTTACACAAGAATCATGAAGGGTATTTTTGAAGCCGAAGGCAAAGGAACGAAAAGTCTGAAGACTTGGGTGTTGAAGTTTTTGTTTACATTTGTAGAGGATGATGCAAATTTCTAA 3618 0.4422 MYPKRSNQGDGPGSRPVRTSDRIKTRPNIYGRPYLYYSSKRTRKGKNKTRTAASQIAKMLRPRDRPAQDSNASNSAATNLRRSTRKRRISVNLEGFTDSSGAEDEDLMRPTYQQPRKQIDQSVSQDELRSRKHKKAVETKPNPRREGLRPRRSKSVVREPLNSESDDDQDYSEEKVGQDETENGNDLDENDADDGQNEIEGDAEGEDEGDDEDEDEGDDEDGDGDDEDGEEEQDGRRRYDLRNRADVRRFSMEEGKAQPRSPRRVLHQGMGSKVGRDVRKGGSRVHKRYRLARPEDSDDSILVDELDQGPAIPWGRGGSRSGPPWLFGGLDTHGTTAWGLNLAASGWGHQGDALATLTSGIQSAGPSSKGGADIQPLQVDDSVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPSKELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYMSDDKFLIDVDSVKVEKYHFIEAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLEEAMKFISDIFPPVAVAAELSKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFNVWWETAHEQLRAVLLTLLEELPSNIPILLLGTSSVSHDEVDEVPPSIFPPRSVYNMNLPSAEDRTSFFNCLVDAALSVSLEKTSKKSQETAPLPELPKAPKLAGGVKVSELKATVEAEQHALRRLRMCLRDICNRILYDKRFVAFHYPVSDEDAPNYRSIIQNPMDMATILQHVDNGHYITCSAFLQDIDLIVSNAKAYNGDDYNGSRIVSRACELRDAVHGMLSQMDPALVAYCDKIAAQGGPVNLPDELRDSTFPSTPVVQLGTTTRMSARLRNVQPEVNMDKSYEALKRTKRSTDVTHADDKSRQDPLPPKTLPEQQASEVACEGPEPASIDENLHGAGTCEQADDSSIDVTMSDGEFPSQVESVKQLFVKRSENYSIPQLERIYTRIMKGIFEAEGKGTKSLKTWVLKFLFTFVEDDANF 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1685 1205 CDD Bromo_AAA 903 1013 - -
Mibi01g1685 1205 MobiDBLite consensus disorder prediction 183 230 - -
Mibi01g1685 1205 SUPERFAMILY Bromodomain 902 1015 IPR036427 GO:0005515
Mibi01g1685 1205 CDD AAA 419 558 - -
Mibi01g1685 1205 SMART AAA_5 419 560 IPR003593 -
Mibi01g1685 1205 Gene3D - 895 1023 IPR036427 GO:0005515
Mibi01g1685 1205 SMART bromo_6 903 1010 IPR001487 GO:0005515
Mibi01g1685 1205 FunFam ATPase family AAA domain-containing protein 2B 559 644 - -
Mibi01g1685 1205 ProSitePatterns AAA-protein family signature. 528 546 IPR003960 GO:0005524|GO:0016887
Mibi01g1685 1205 Gene3D - 559 644 - -
Mibi01g1685 1205 PANTHER AAA DOMAIN-CONTAINING 40 1040 IPR045199 -
Mibi01g1685 1205 CDD AAA 703 815 - -
Mibi01g1685 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 382 648 IPR027417 -
Mibi01g1685 1205 PRINTS Bromodomain signature 969 988 IPR001487 GO:0005515
Mibi01g1685 1205 PRINTS Bromodomain signature 935 951 IPR001487 GO:0005515
Mibi01g1685 1205 PRINTS Bromodomain signature 951 969 IPR001487 GO:0005515
Mibi01g1685 1205 ProSiteProfiles Bromodomain profile. 926 988 IPR001487 GO:0005515
Mibi01g1685 1205 MobiDBLite consensus disorder prediction 1060 1110 - -
Mibi01g1685 1205 Gene3D - 691 855 IPR027417 -
Mibi01g1685 1205 Pfam ATPase family associated with various cellular activities (AAA) 423 558 IPR003959 GO:0005524|GO:0016887
Mibi01g1685 1205 MobiDBLite consensus disorder prediction 231 261 - -
Mibi01g1685 1205 MobiDBLite consensus disorder prediction 1066 1092 - -
Mibi01g1685 1205 Pfam AAA+ lid domain 585 622 IPR041569 -
Mibi01g1685 1205 Gene3D - 381 651 IPR027417 -
Mibi01g1685 1205 MobiDBLite consensus disorder prediction 1 283 - -
Mibi01g1685 1205 FunFam ATPase family AAA domain-containing protein 895 1023 - -
Mibi01g1685 1205 MobiDBLite consensus disorder prediction 122 165 - -
Mibi01g1685 1205 Pfam Bromodomain 915 984 IPR001487 GO:0005515
Mibi01g1685 1205 FunFam ATPase family, AAA domain-containing 2 381 564 - -
Mibi01g1685 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 707 856 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1685 Mibi-ChrMibi01 24963304 24970460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1685 369 617 Calmodulin-binding Proteins AT3G56690 37.154 3.49e-41 163