Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1675 ATGATTTCCGTTGAATCCCACCAAAAACCACACATCTCTGATCCTCCTTCCAAACATGACACTAAATCTCCAGATTCCACCCAGAATGATGTTCACATCTTCAAATCCAAATTACCAGACATACCTATCTCCAACAATCTCCCCCTCCACTCTTACTGCTTCGAAAGCCTCTCTCAATTCTCCGATCGCCCCTGCCTCATCGTCGGCTCCACCGGAAAAATCTACACCTACGCCGAAGCTCACCTCCAATCAAGAAAAATCGCCGCCGGATTCTCCAAGCTAGGCATCAAGAAAGGTGACGTCATCATGATCCTCCTCCAGAACTCCGCCGAATTCGTCCTCTCCTTCTTCGCCGCCTCCATGATCGGCGCCGTCGCCACCACCGCCAACCCTTTCTACACCGCCGACGAGATCTTCAAGCAGTTCCACGCCTCCAACGCCAAGCTCATCATCACCCAATCCGTCCACGTCGAAAAACTCTGCTGCCACCACCACGAGGGCGGCGGAGAAATCAACGGAGACGACGATAATAAACTCAGGGTAATCACCGTCGATAATCCGCCGGAGAAATGCATGCATTTCTCGGTGGTATCGGAGGCCGATGAGAACGAATTACCGGAGGTGGAGATCTTACCGGACGATCCGGTGGCGCTTCCGTTTTCGTCGGGGACGACGGGGTTGCCGAAGGGGGTGATTTTGACGCACAGGAGCTTGGCGACGAGTGTGGCGCAACAGGTTGATGGAGAGAATCCGAATCTGTATTTGAAACCAGAGGATGTGTTGCTCTGTGTTCTTCCTTTGTTTCACATATTTGCTCTCAACACTGTCATGTTGTGTGCTCTGAGGGCGGGAAGTGCGATTTTGCTGATGCATAAGTTTGAGATACGTGCGTTGTTGGAATTGACGCAGAAGCATAAGGTGTCGGTGGCGATGGTGGTGCCTCCATTGGTACTGGCGTTGACAAAGAATCCGATGGTGGCGGATTATGATCTGAGTTCGATTCGGTTGGTGATGTCAGGGGCGGCGCCGTTGGGGAAGGAGTTGGGTGAAGCTCTGAGAGGCAGAGTGCCTCAGGCGGTTTTGGGTCAGGGGTACGGGATGACGGAGGCAGGGCCCGTGTTGTCAATGTGCCTGGGATTTGCAAAAGAACCGTTCGCAACAAAGTCAGAATCATGTGGCACAGTGATCAGAAATGCAGAGCTCAAAGTGCTTGACCCTGAAACTGGCCTCTCTCTTGGCTACAACCAGCCTGGTGAGATTTGCATCCGAGGCCAACAAATCATGAAAGGATATCTGGATAATGAGAAGGCGACGGCAGAAACAATTGATGGAGAGGGATGGCTTCACACGGGGGATATTGGCTACATAGATGACGACGACGAGTTATTCATAGTCGACAGAGTTAAGGAGCTCATCAAATTCAAAGGCTTCCAGGTGCCACCCGCTGAACTTGAAGACCTTCTTGTAAGTCACCCTTCCATTGCAGACGCAGCTGTCGTCCCGCAAAAGGATGAGGTTGCTGGTGAACTTCCTGTTGCTTTTGTGGTAAGGTCAAATGGCTTTGATCTTACTGAAGAGGCTGTAAAGGAATACATAGCTAAACGGGTAGTGTTTTACAAAAGAGTACACAAAGTGTACTTCGTTCAAGCAATCCCAAAGTCTCCATCTGGCAAGATATTGAGAAAAGATTTGAGAGCAAAGCTAGAGAGCAATAGCATCCAAACGACTTGA 1731 0.5049 MISVESHQKPHISDPPSKHDTKSPDSTQNDVHIFKSKLPDIPISNNLPLHSYCFESLSQFSDRPCLIVGSTGKIYTYAEAHLQSRKIAAGFSKLGIKKGDVIMILLQNSAEFVLSFFAASMIGAVATTANPFYTADEIFKQFHASNAKLIITQSVHVEKLCCHHHEGGGEINGDDDNKLRVITVDNPPEKCMHFSVVSEADENELPEVEILPDDPVALPFSSGTTGLPKGVILTHRSLATSVAQQVDGENPNLYLKPEDVLLCVLPLFHIFALNTVMLCALRAGSAILLMHKFEIRALLELTQKHKVSVAMVVPPLVLALTKNPMVADYDLSSIRLVMSGAAPLGKELGEALRGRVPQAVLGQGYGMTEAGPVLSMCLGFAKEPFATKSESCGTVIRNAELKVLDPETGLSLGYNQPGEICIRGQQIMKGYLDNEKATAETIDGEGWLHTGDIGYIDDDDELFIVDRVKELIKFKGFQVPPAELEDLLVSHPSIADAAVVPQKDEVAGELPVAFVVRSNGFDLTEEAVKEYIAKRVVFYKRVHKVYFVQAIPKSPSGKILRKDLRAKLESNSIQTT 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1675 576 MobiDBLite consensus disorder prediction 1 29 - -
Mibi01g1675 576 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 29 566 - -
Mibi01g1675 576 FunFam Long-chain-fatty-acid--CoA ligase FadD 35 469 - -
Mibi01g1675 576 ProSitePatterns Putative AMP-binding domain signature. 218 229 IPR020845 -
Mibi01g1675 576 Pfam AMP-binding enzyme 55 474 IPR000873 -
Mibi01g1675 576 SUPERFAMILY Acetyl-CoA synthetase-like 41 570 - -
Mibi01g1675 576 Gene3D - 469 573 IPR045851 -
Mibi01g1675 576 Pfam AMP-binding enzyme C-terminal domain 483 558 IPR025110 -
Mibi01g1675 576 MobiDBLite consensus disorder prediction 11 26 - -
Mibi01g1675 576 CDD 4CL 43 564 - -
Mibi01g1675 576 Gene3D - 24 468 IPR042099 -
Mibi01g1675 576 FunFam 4-coumarate--CoA ligase 2 470 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1675 Mibi-ChrMibi01 24773175 24782164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1675 32 481 Monolignol Biosynthesis Gene Families AT1G65060 69.095 0.0 632