Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1674 ATGATTTCCGTTGAATCCCACCAAAAACCACACATCTCTGATCCTCCTCCCAAACATGACACTAAATCTCCAGATTCCACCCAGAATGATGTTCACATCTTCAAATCCAAATTACCAGACATACCTATCTCCAACAATCTCCCCCTCCACTCTTACTGCTTCGAGAACCTCCCTCAATTCTCCGATCGCCCCTGCCTCATCGTCGGCTCCACCGGAAAAATCTACACCTACGCCGAAGCTCACCTCCAATCCAGGAAAATCGCCGCCGGATTCTCCAAGCTAGGAATCAAGAAAGGTGACGTCATCATGATCCTCCTCCAGAACTCCGCCGAATTCGTCCTCTCCTTCTTCGCCGCCTCCATGATCGGCGCCGTCGCCACCACCGCCAACCCTTTCTACACCGCCGACGAGATCTTCAAGCAGTTACACGCCTCCAACGCCAAGCTCATCATCACCCAATCCGCCTACGTCGAAAAACTCCGCTGCCACCACCACGAGGCCGGCGGAGAGATCGACGGAGACGACGATAATAATAATAAACTCAGGGTAATCACCGTCGATGATCCGCCGGAGAAATGCATGCATTTCTCGGTGGTATCGGAGGCCGATGAGAACGAATTACCGGAGGTGGAGATCTTACCGGACGATCCGGTGGCGCTTCCGTTTTCGTCGGGGACGACGGGGTTGCCGAAGGGGGTGATTTTGACGCACAGGAGCTTGGCGACGAGTGTGGCGCAACAGGTTGATGGAGAGAATCCGAATCTGTATTTGAAACAAGAGGATGTGTTGCTCTGTGTTCTTCCTCTGTTTCACATATTTGCTCTCAACACTGTCATGTTGTGTGCTCTGAGGGCGGGAAGTGCGATTTTGCTGATGCATAAGTTTGAGATACGTGCGTTGTTGGAATTGACGCAGAAGCATAAGGTGTCGGTGGCGATGGTGGTGCCTCCATTGGTACTGGCGTTGACAAAGAATCCGATGGTGGCGGATTATGATCTGAGTTCGATTCGGTTGGTGATGTCAGGGGCGGCGCCGTTGGGGAAGGAGTTGGGTGAAGCTCTGAGAGGCAGAGTGCCTCAGGCGGTTTTGGGTCAGGGGTACGGGATGACGGAGGCAGGGCCCGTGTTGTCAATGTGCCTGGGATTTGCAAAAGAACCGTTCGCAACAAAGTCAGAATCATGTGGCACAGTGATCAGAAATGCAGAGCTCAAAGTGCTTGACCCTGAAACTGGCCTCTCTCTTGGCTACAACCAGCCTGGTGAGATTTGCATCCGAGGCCAACAAATCATGAAAGGATATCTGGATAATGAGAAGGCGACGGCAGAAACAATTGATGGAGAGGGATGGCTTCACACGGGGGATATTGGCTACATAGATGACGACGACGAGTTATTCATAGTCGACAGAGTTAAGGAGCTCATCAAATTCAAAGGCTTCCAGGTGCCACCCGCTGAACTTGAAGACCTTCTTGTAAGTCACCCTTCCATTGCAGACGCAGCTGTCGTCCCGCAAAAGGATGAGGTTGCTGGTGAACTTCCTGTTGCTTTTGTGGTAAGGTCAAATGGCTTTGATCTTACTGAAGAGGCTGTAAAGGAATACATAGCTAAACGGGTACGTTCCCTTCTTTAA 1629 0.5144 MISVESHQKPHISDPPPKHDTKSPDSTQNDVHIFKSKLPDIPISNNLPLHSYCFENLPQFSDRPCLIVGSTGKIYTYAEAHLQSRKIAAGFSKLGIKKGDVIMILLQNSAEFVLSFFAASMIGAVATTANPFYTADEIFKQLHASNAKLIITQSAYVEKLRCHHHEAGGEIDGDDDNNNKLRVITVDDPPEKCMHFSVVSEADENELPEVEILPDDPVALPFSSGTTGLPKGVILTHRSLATSVAQQVDGENPNLYLKQEDVLLCVLPLFHIFALNTVMLCALRAGSAILLMHKFEIRALLELTQKHKVSVAMVVPPLVLALTKNPMVADYDLSSIRLVMSGAAPLGKELGEALRGRVPQAVLGQGYGMTEAGPVLSMCLGFAKEPFATKSESCGTVIRNAELKVLDPETGLSLGYNQPGEICIRGQQIMKGYLDNEKATAETIDGEGWLHTGDIGYIDDDDELFIVDRVKELIKFKGFQVPPAELEDLLVSHPSIADAAVVPQKDEVAGELPVAFVVRSNGFDLTEEAVKEYIAKRVRSLL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1674 542 MobiDBLite consensus disorder prediction 1 29 - -
Mibi01g1674 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 29 538 - -
Mibi01g1674 542 SUPERFAMILY Acetyl-CoA synthetase-like 43 538 - -
Mibi01g1674 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 35 471 - -
Mibi01g1674 542 MobiDBLite consensus disorder prediction 11 26 - -
Mibi01g1674 542 ProSitePatterns Putative AMP-binding domain signature. 220 231 IPR020845 -
Mibi01g1674 542 Pfam AMP-binding enzyme 57 476 IPR000873 -
Mibi01g1674 542 Gene3D - 471 541 IPR045851 -
Mibi01g1674 542 CDD 4CL 43 538 - -
Mibi01g1674 542 Gene3D - 24 470 IPR042099 -
Mibi01g1674 542 Pfam AMP-binding enzyme C-terminal domain 485 539 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1674 Mibi-ChrMibi01 24724373 24732434 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1674 32 483 Monolignol Biosynthesis Gene Families AT1G65060 68.571 0.0 634