Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1668 ATGGGACGTTCGCCTTGTTGCGAGAAAGCCCACACAAACAAAGGCGCTTGGACCAAAGATGAAGACCAACGCCTCATCGATTACATCCGCCTCCATGGCGAAGGCTCCTGGCGCTCTCTCCCCAAGGCTGCTGGATTGCTTAGATGCGGAAAGAGTTGCAGGCTGCGATGGATTAACTACCTCCGTCCCGATCTCAAACGCGGCAATTTCTCCCAAGATGAAGACGACCTCATCATCAAGCTCCACTCTCTCCTCGGAAACAAGTGGTCTCTGATTGCGGCGAGATTACCTGGAAGGACCGACAATGAGATCAAGAATTACTGGAACACTCATATAAAGCGAAAGCTCATCAGCCGCGGAATCAATCCCCAAACTCACCGTCCTCTCAACGAAACCGCCGTCGTATCTGTTAAATCCGCCGCCCAGTGGGACTTCAACGCCTTGCCGGCGCCGGAAAACGACCTCCTCGGTAACAATCAGAAGAATCAGAAGCAGGAAACTGGTGATAATTTCAATTTCAATTTCAATTGCATCGATTTCAGAAGCATCAAGGCGATTGAGGAGTTGAACAACCCTAGCAGTGGTACAACTTCAGAAGAGGAAGAAGATTCGCCGTTACCGGAGCGAGATTCTTCGATTCGTGGTGGTTGTGAGCCCAATCTGGAGCTTTCCATCGGTCTCGTGCCGTTTCACTCCGAGTCGACTCGTACGGCGGCGCCGGTGAACTTGGCCGAGTCGAGGATCGGGTTGATGCGGTCGCCGGCGGCCACGGCGGTGACGGCGGCAGCGTGCCGGAGCTGGCAATTTGATTTTGAGAGGTGGGGAAGTGCATGGGAAAAGTGA 843 0.5338 MGRSPCCEKAHTNKGAWTKDEDQRLIDYIRLHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSQDEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLISRGINPQTHRPLNETAVVSVKSAAQWDFNALPAPENDLLGNNQKNQKQETGDNFNFNFNCIDFRSIKAIEELNNPSSGTTSEEEEDSPLPERDSSIRGGCEPNLELSIGLVPFHSESTRTAAPVNLAESRIGLMRSPAATAVTAAACRSWQFDFERWGSAWEK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1668 280 MobiDBLite consensus disorder prediction 189 215 - -
Mibi01g1668 280 SMART sant 13 63 IPR001005 -
Mibi01g1668 280 SMART sant 66 114 IPR001005 -
Mibi01g1668 280 Gene3D - 69 133 - -
Mibi01g1668 280 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi01g1668 280 FunFam Myb transcription factor 68 137 - -
Mibi01g1668 280 FunFam MYB-related transcription factor 13 66 - -
Mibi01g1668 280 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi01g1668 280 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mibi01g1668 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi01g1668 280 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Mibi01g1668 280 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi01g1668 280 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 198 - -
Mibi01g1668 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi01g1668 280 CDD SANT 16 61 IPR001005 -
Mibi01g1668 280 CDD SANT 69 112 IPR001005 -
Mibi01g1668 280 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1668 Mibi-ChrMibi01 24650347 24651364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1668 1 153 MYB Transcription Factor Family AT4G09460 76.074 1.05e-87 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g1668 Myb_DNA-binding 1e-14 CL0123