Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1658 ATGGAACAGACGTCGGAAGGTAGCGGCGGAGGCGGCGGCTGCGACGGTGGGATTTCCCGGTTCCGTTCAACTCCGGCGACGTGGTTAGAAGCTTTGCTTAAAGAAGAAGATGTAGAAGAAGACCCATTGGGTCCCACACAGTGCTTCACTCAGCTCCTCGCTACAGGTACTGAAAATTTGTCTAGAAATTCTGCGCCTTTCGATTCTCCGGTGGCTGATAGAGGCGCTTTCGATGTTGGGTCGTCTTCGTCTGCTGGATTTTCCCGCCAGAATAGTTCTCCGGCGAATTTATTTGGTCATTCAATGGTTACAGCCTCTGAAACAGGGTATTTCCCTAAGTATGGGGTTCAATACAGTCATGATGTTAGCCCACAAGATATCGATGTTCTTTCTATGGCTGATTTTAAACCAATCAGACAGAATGTTGAGCATACTGGAAAAGCACCAGACATAGACATTGAGAAGATTTTGGAGGATTCTGTACCTTGCAGAGTTCGGGCGAAGCGTGGACATGCTACACATCCAAGGAGCATTGCTGAAAGGGTTCGTAGAACTCGGATAAGTGATCGCATACGGAAGCTTCAAGAACTTGTGCCAAATATGGACAAGCAAACAAATACTGCAGAAATGCTAGACGAGGCTGTAGCATATGTGAAGTCTCTGCAGAAGCAAATCGAGGAACTTACAGAGCACCAAAGAAAATGCAAATGCACAGTTCAAGAGTAA 726 0.4669 MEQTSEGSGGGGGCDGGISRFRSTPATWLEALLKEEDVEEDPLGPTQCFTQLLATGTENLSRNSAPFDSPVADRGAFDVGSSSSAGFSRQNSSPANLFGHSMVTASETGYFPKYGVQYSHDVSPQDIDVLSMADFKPIRQNVEHTGKAPDIDIEKILEDSVPCRVRAKRGHATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKSLQKQIEELTEHQRKCKCTVQE 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1658 241 Gene3D - 168 241 IPR036638 GO:0046983
Mibi01g1658 241 SMART finulus 177 227 IPR011598 GO:0046983
Mibi01g1658 241 Pfam Helix-loop-helix DNA-binding domain 176 222 IPR011598 GO:0046983
Mibi01g1658 241 FunFam Transcription factor bHLH130 family 172 240 - -
Mibi01g1658 241 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 221 IPR011598 GO:0046983
Mibi01g1658 241 MobiDBLite consensus disorder prediction 1 21 - -
Mibi01g1658 241 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 82 235 - -
Mibi01g1658 241 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 170 237 IPR036638 GO:0046983
Mibi01g1658 241 Coils Coil 211 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1658 Mibi-ChrMibi01 24473437 24481944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1658 20 241 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 46.502 2.48e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g1658 HLH 1e-09 No_clan