Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1654 ATGATGATGGAAAGATCAAGATCATCAGAGAGTGATAATGAAAGTAATGGTGGTGGGTTGAAGAAGGGGCCATGGACAGCAGAAGAGGATAGAATACTTGTGGAATACATTGAGAAAAATGGACATGGAAGCTGGAGAGCGCTTCCAAAGTTGGCAGGATTGAACAGATGTGGCAAAAGTTGCAGACTTAGATGGACTAATTATCTAAGGCCTGACATCAAAAGAGGCAATTTCTCTGACCAAGAACAGCAACTCATTATCAACTTGCATGCAGTTCTTGGCAACAAGTGGGCGACCATAGCAGGTCATCTACCAGGGAGAACTGACAATGAAATAAAGAACTTTTGGAATACTCATTTGAAGAAGAAGCTCTTGCAAATGGGGTTAGACCCAGTGACTCATCGTCCAAGATCTCATCATCTTAATCTTCTCTCCAATCTCCAACACTTACTATCTCCTCTCACACCAAATAATAATAACCCTAATTATAATCATCATCATTGGGACAACATTCTTAATACTATCCAAACTTTGTCCCCTTCACAACTAGCTAAACTCCATCTGCTACACAACCTACTTCAAGTTCTTGCAATGGCTACTACTGCTACTACTACTACTACTAGTACTAATCCGGCTCAGTATAATCTCGAGCCACTTGTAAATCTCGGATTGATGATGGATCAACCTCCTCTCTTACAAGAAAATCAAGCCGTTGGAAATTTTCATTCTCTTTCAAATTTGTCAAATGTTGAGGGTATTCTTCATAATCTTCAACAGCAGCAACATCAACCACAAGCAGTGGTGAGTGATGATCATGAGTTTCTTAAGACAATGCCATGTTTGGCTGCTCCGGTGACATCACCTCCTTCGAGTTCGCTTCCCAATCTGATTTCACCCACACTGGATTGCTCCTCGTCACCATCTTTTAACAAAATGAAAGACAAGGTAAACCAAAATGATGATGGCACTCTTCCTTCTACTTCAACAGCTACCTTTGATACTTTGGGAGATTTTATGGATGAGCGAGCAAGTGAAGCTTTCTGGAAACATCTTATTGAGTAA 1062 0.4068 MMMERSRSSESDNESNGGGLKKGPWTAEEDRILVEYIEKNGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGNFSDQEQQLIINLHAVLGNKWATIAGHLPGRTDNEIKNFWNTHLKKKLLQMGLDPVTHRPRSHHLNLLSNLQHLLSPLTPNNNNPNYNHHHWDNILNTIQTLSPSQLAKLHLLHNLLQVLAMATTATTTTTSTNPAQYNLEPLVNLGLMMDQPPLLQENQAVGNFHSLSNLSNVEGILHNLQQQQHQPQAVVSDDHEFLKTMPCLAAPVTSPPSSSLPNLISPTLDCSSSPSFNKMKDKVNQNDDGTLPSTSTATFDTLGDFMDERASEAFWKHLIE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1654 353 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Mibi01g1654 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 69 IPR017930 -
Mibi01g1654 353 Gene3D - 77 124 - -
Mibi01g1654 353 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Mibi01g1654 353 Gene3D - 21 74 - -
Mibi01g1654 353 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Mibi01g1654 353 FunFam Transcription factor MYB39 77 138 - -
Mibi01g1654 353 MobiDBLite consensus disorder prediction 1 24 - -
Mibi01g1654 353 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 15 245 - -
Mibi01g1654 353 Pfam Myb-like DNA-binding domain 75 120 IPR001005 -
Mibi01g1654 353 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Mibi01g1654 353 SMART sant 21 71 IPR001005 -
Mibi01g1654 353 SMART sant 74 122 IPR001005 -
Mibi01g1654 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Mibi01g1654 353 CDD SANT 24 69 IPR001005 -
Mibi01g1654 353 FunFam MYB-related transcription factor 21 74 - -
Mibi01g1654 353 CDD SANT 77 120 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1654 Mibi-ChrMibi01 24433971 24435679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1654 19 353 MYB Transcription Factor Family AT5G16770 45.640 1.48e-87 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g1654 Myb_DNA-binding 5e-15 CL0123