Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1644 ATGAGAGGGTTAGCAACAACCTCTTCTTCCTTCAATTACCAATGGAGTTATGATGTTTTTATCAACTTTAGAGGTGAAGATACTCGTCATGGTTTTACTGGAAATTTGTATCATTCTCTTACTCAAAAGGGAGTTCGCACCTTCTTTGATGATGAGGAATTAAGAAGAGGGGATGAAATTAACCCCACACTTCTCAGAGCCATAGAAAATTCTAGGATGGCCATTACTGTGTTTTCTAAGAATTATGCTTCTTCCACATTTTGTCTCAACGAACTTGTTAAGATCTATCAGTGCATTAAGAGAAAGGGTCGGTTGGTTTTGCCAATTTTTTATGACGTGGAGCCTTCAGAAGTGCGATATCAGAAAGAAAGTTATGAACAAGCATTGTCTGTGCATATGAAAAACCGCAGGACTGATGAGCGAAAGATACAAAGTTGGAAGCTTGCATTGCATGAAGTGTCTAATATTTCTGGCTTCCATTTTGATCCAAGGCATGGTTACGAATATCAATTCATTGAAAGGATTGTGCAAGAAATCTCTAATAAAATTGATAGGGTTCCTTTACATGTTTCTAGACATCCTGTTGGGTTAAAGTCTCGAGTGTTAACTATAAACTCTCTGTTACAAATTGGGTCAAATGACAAGGCCATCATGGTAGGAATTTGTGGAATTGGTGGGATGGGTAAAACAACGTTAGCACGTGCTGTGTACAATTCAGTGGCTGATAAATTTGAAGGCTTGTGTTTTCTCCATGATGTCAAAGAAAAATCAAGGAAACTTGGCCTTGCACAAATGCAAGAGCAAATGCTCTTGGACATTGTAGGAGAAGGCATCAGAATACAAGATGCTTACAGAGGAGTTGAAGTAATAAAAATGAGACTCAAACAAAAGAAAATTCTTTTGATTCTTGATGATATTGATAAGCTTGAGCAATTGGAAAAGCTAGCTGGTGATTGCAATTGGTTTAGTGGTGGGAGTAGGATCATTATAACGACAAGGGATAAACATTTACTTGTAACACATGGGGTTGAAAGTATTTATAACATGGAGGCTTTCAATGCTAAAGAATCTATAGAATTGTTACGTTGGAATGCATTTAGAAATAACCAGGTAAATCCAAATCATATGGAGGTCTTGAATCGTGCAATAATTTATGCACAAGGCCTTCCACTAGCTCTTGAAGCAATAGGCTCTAACTTGTGTGGAAGGACTATAAATGAGTGGGAATCTGCATTGGACGCGTATAAATTGATTCCTAACAAAGACATTCAACAAGTATTGAAGTTATTAACTGGTGTTTAG 1302 0.3725 MRGLATTSSSFNYQWSYDVFINFRGEDTRHGFTGNLYHSLTQKGVRTFFDDEELRRGDEINPTLLRAIENSRMAITVFSKNYASSTFCLNELVKIYQCIKRKGRLVLPIFYDVEPSEVRYQKESYEQALSVHMKNRRTDERKIQSWKLALHEVSNISGFHFDPRHGYEYQFIERIVQEISNKIDRVPLHVSRHPVGLKSRVLTINSLLQIGSNDKAIMVGICGIGGMGKTTLARAVYNSVADKFEGLCFLHDVKEKSRKLGLAQMQEQMLLDIVGEGIRIQDAYRGVEVIKMRLKQKKILLILDDIDKLEQLEKLAGDCNWFSGGSRIIITTRDKHLLVTHGVESIYNMEAFNAKESIELLRWNAFRNNQVNPNHMEVLNRAIIYAQGLPLALEAIGSNLCGRTINEWESALDAYKLIPNKDIQQVLKLLTGV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1644 433 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Mibi01g1644 433 SMART AAA_5 215 350 IPR003593 -
Mibi01g1644 433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 429 IPR027417 -
Mibi01g1644 433 Pfam NB-ARC domain 206 414 IPR002182 GO:0043531
Mibi01g1644 433 SMART till_3 16 156 IPR000157 GO:0007165
Mibi01g1644 433 Gene3D - 13 183 IPR035897 -
Mibi01g1644 433 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Mibi01g1644 433 PRINTS Disease resistance protein signature 386 400 - -
Mibi01g1644 433 PRINTS Disease resistance protein signature 293 307 - -
Mibi01g1644 433 PRINTS Disease resistance protein signature 218 233 - -
Mibi01g1644 433 Gene3D - 352 430 IPR042197 -
Mibi01g1644 433 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 416 IPR044974 GO:0006952
Mibi01g1644 433 Gene3D - 184 346 IPR027417 -
Mibi01g1644 433 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Mibi01g1644 433 Pfam TIR domain 17 183 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1644 Mibi-ChrMibi01 24228489 24230803 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1644 11 361 WRKY Transcription Factor Family AT4G12020 26.816 8.87e-28 115