Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1628 ATGGACATGCCTTCTTCTTCTTCTTCAAGGACCTCTGTCCATGGAGCCTCATCTTCTCCATACAGAGGCGTACGCAAGAGGAAGTGGGGAAAATGGGTATCAGAAATCAGAGAGCCAGGAACCAAGACAAGGATTTGGCTAGGAAGCTTCGAGACGCCGGAGATGGCGGCGACAGCCTATGACGTGGCGGCCCTCCACTTCCGTGGCCGTGACGCCCGCCTCAACTTCCCCGAACTCGCCTCCGCCCTCCCCCGACCGGCCGCCAACAATGCCGACGACATTCGTATGGCCGCTCATGAGGCAGCCCTAAGGCTCATGATGAACAACAACAACAACAACAATAACATCAACAACAACAATAATTATTATAATGATCCTTCGTCAGCAGTAGTAGCAGCAGAAGAAGCCGGTGTGCCGGTGGGCCCCACCGGTGGTATCGATGACGACGATGCCGGGGTGGGGCCGGTCACCGTGAGGCTGTCGCCGACGCAGATACAGGCGATCAATGAGTCGCCGTTGGACTCACCGCCGAAGATGTGGATGCAAATGTCGGAGACGTTGATGTTGGATGAACAATATCCTCCTCAGGTGATGTTTGAAGAGAATGATAATAGTAATGAAGATATGTGGCAGAATATTCAGAGTGATTCTCTTTGGGATCCTTAA 666 0.53 MDMPSSSSSRTSVHGASSSPYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAATAYDVAALHFRGRDARLNFPELASALPRPAANNADDIRMAAHEAALRLMMNNNNNNNNINNNNNYYNDPSSAVVAAEEAGVPVGPTGGIDDDDAGVGPVTVRLSPTQIQAINESPLDSPPKMWMQMSETLMLDEQYPPQVMFEENDNSNEDMWQNIQSDSLWDP 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1628 221 SUPERFAMILY DNA-binding domain 19 78 IPR016177 GO:0003677
Mibi01g1628 221 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 182 - -
Mibi01g1628 221 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Mibi01g1628 221 MobiDBLite consensus disorder prediction 1 18 - -
Mibi01g1628 221 FunFam Ethylene-responsive transcription factor 2 19 78 - -
Mibi01g1628 221 Pfam AP2 domain 21 69 IPR001471 GO:0003700|GO:0006355
Mibi01g1628 221 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Mibi01g1628 221 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Mibi01g1628 221 MobiDBLite consensus disorder prediction 200 221 - -
Mibi01g1628 221 MobiDBLite consensus disorder prediction 1 22 - -
Mibi01g1628 221 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
Mibi01g1628 221 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Mibi01g1628 221 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1628 Mibi-ChrMibi01 23826316 23826981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1628 19 221 AP2-EREBP Transcription Factor Family AT1G71450 50.739 1.43e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi01g1628 AP2 1.1e-12 CL0081