Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1618 ATGAGACACATTTTGTTTGAACTCTGCTTTTTGACCTTCTTATGTGTTACTTTTGCTCTGAGCCCTGATGGGGTCACTCTGATTTCACTCTCTAAGCATTGGACATTTGTGCCTCCTTCCATTAATTCAAGCTGGAATGTTTCTGAATCAACTCCATGCTCATGGGTAGGAATCCAATGCGACCAGGCCCACAGTGTAATCTCCCTGAACCTTACTTCTTTTTCAATCTCTGGTCAATTAGGCCTTGAAATAGGACAACTGAATAGTTTACAAACTCTTGTGTTTTCTTCTACTAGTCTCTCTGGAAGAATTCCCCCAGAGATAGGAAATTGTAGCATGTTGAAGTATCTGGACCTTTCCCAGAACTACTTCACAGGAAAAATACCAAATGGCTTGAGCAATTGTAGTATGCTTGAGCACTTGGATCTTTCCAATAACACTCTTAGTGGGGAAATTCCAGATAGCTTCAGAAGGTTAAAAAATCTGAAGAATTTGTACCTTCATTCCAATTTAATTCTTAGTGGTGAAATTCCTGAATACTTGTTTGATTTTCCTCAACTGGAGTCTCTAGCTTTGCAAAACAACAACCTAAGTGGTCCTATTCCAATGAATATTGGCAATAGCACCAAACTTAGGATGTTGTATTTGTACAATAATCGATTGTTTGGGATCATACCAACGTCCATTGGAAACTGCACTGAATTAGAGCAGGTGTTTCTTAATGAGAACCAATTACAGGGGAATTTGCCTCAGAATCTTGATAATCTCCAGAATCTTGTGTATTTTAGTGTCAAAGACAATAATCTTGAGGGTCCAATTTCATTAGGTTCTGGAATTTGCAGGAGTCTATATTATTTGGATTTGTCATTCAATGTGTTTAGTGGAGAAATACCTATTGGATTAGGGAATTGTAGTGGCTTGACCGAATTTTATGCTGTGAATAGCAACTTTGTAGGTAACATCCCAATTTTCTTGGGCTCACTAAGCAAACTCTCTATTCTTCACCTTTCTATAAACCATTTGTCTGGAAAAATACCTCCAGAAATTAGCCGTTGTCTGTCTTTGAAGGAGTTGCATTTGGACACCAATCAGCTTGAGGGAGAAATTCCTAGTGAGTTGGGAATGCTAACGGAGTTGCAGATTTTGCTATTGTTTTACAACCAACTGACAGGTGAAATCCCTGTTGGCATATGGAAGATTCCAAGTCTCATGGCTATTCAATTGTACAATAACAAATTTCATGGGGAATTACCTTTAGAAATCACTGAGCTAAAGCAGCTACAATATATCTCATTGGCTGTGAACAACTTCTCTGGAGTTATACCTCACAGTCTAGGAATAAATAGTACTTTGGTATGGTTGGACTTGAGAGATAACAAGTTTACCGGTCATCTCCCTCCAAATATTTGCCTTGGAAGGAAATTAGAGAGGTTGGTTGTGGGTGATAATCAACTGCAAGGTAGAATACCATCCAGCATAGGAGGCTGTACAAGTCTTACAAGGTTGATTCTCAAATCAAATAATTTTACAGGACCCCTTCCTGCTTTTGAAAATAATATGAGTCTTGGATACATGGACATCAACAATAATAGCATCAGTGAAACAATTCGATCTAGTTTAGGGAATTGCAAAAACCTCACTTATATTAATTTGTCCATGAACAAACTTGTAGGACTCATACCACCAGAGTTGGGAAACCTTGTAAACCTTCAAGAGTTGAATCTTTCTTACAACAATTTGGAGGGCCCATTGCCATCTTACCTGTCAAACTGTATCAAAATGGAAATTTTTGACGTGGGGTTCAATTACTTGAATAGTTCATTTCCATCAAGCTTGATTGCTTGGACAGGGATATCAACTTTGATCTTAACAGAGAATCATTTTACAGGGGGTATCCCAACATTTTTATCAGAATTTCAAAAGCTTTCTGACCTAAAGCTTGGGGGCAATTCATTTGGAGGTGAAATTCCTGGCTCAATTGGATCGTTGCAGAATCTACTCTATGGATTGGATCTAAGTGCTAATGGGCTAATAGGTGAGATTCCATTGGAGATTGGGAAGCTGAAAATGCTCCAAAGATTGGATTTGTCACTTAACAATTTGTCCAAAAGCATAGAAGTTCTAGGACATCTCTCTTCATTGGTTGAAGTTAATATATCGTTCAATTCCTTTGTCGGTCCTGTACCAAATACGCTGATGAAGCTGATGAATTCTTATCCATCATCATTCTTGGGTAATCCTTGGTTATGCATTAATTGTTTTTCCTTTGATAGCCTAAATTGCCCTAAGAATGTCAGTTTGAGGATTTGTGATCACAAATCAAGTCATCATAAAGGATTGAGTAAGTTGAAAATCATAGCAATATCAGCTGGATCTTCCTTTTTCATTATTCTTTTATTGCTATGTCTAGCTTTTATGCTTCTCTTTGGCAGAAGATCTCTGCAAGATGTCAGAATCTTTCCTGGTCAAAATTCATCTTCTTCTCTTCTCAAGAAAATCTTCAGTGCTACTGAAAACCTAAATGATCGGTACATAATTGGCAAAGGAGCTCATGGAATTGTCTTTAAAGTTTCATTAAATCCAGAAAAAGTCTTTGCTTTGAAGAAATTTTCATTTGCTAACAACCAAGGTCAAAGCAAGAGCATGAGTAGAGAACTTGAAACCATAGGGAAGATTAGGCATCGAAATCTGGTTAGATTGGAGAACTTCTGGTTGCGAAAAGACTATGGCTTGATCATGTACACCTTCATGCAAAATGGAAGCCTTCATGATGCTCTGCATGAAATAAATCCACCACCATTGTCGTTATGGAGTGTTCGCTATAAGATAGCCTTTGGAATTGCTCAAGGACTAGCATATCTACATTTTGACTGTGATCCAGTCATAGTACATAGAGACATCAAATCAAGCAACATTCTTTTAGATTCTGATATGGAGCCTCATATTGCTGATTTTGGTATTGCTAAGATTTTGAATCAGTCCTCTACTTCAGTGAAGTCTATAGTTGTTCCTGGTACAATGGGGTATATAGCACCAGAGAATGCATTTTCAATTGTGGTGAGCAGAAAATCTGATGTGTATAGTTATGGAGTAGTTTTGCTTGAGCTAATAACGAGAAAGAAGGTGCTGGATGCTTCATTTATGGAGGGAACAGATATAGTGGGGTGGGTCAGATCAGAATGGAAAGAATCAGAAGGAATTGAAGGGATTGTTGATCCAATCCTTGGTGATGAACTTAAGGTTTCTAATGTAAGGGGAGAAGTTGAACAAGTGCTTTTGGTGGCTTTGAGATGTACAGAGAATGATCCAAGTATGAGACCAACAATGAGAGAAGTCATCAGCAATTTGATTATTAGAAGAAGCAAAGTTTATGGCAATAGAGTTATTAAAGCTTGA 3396 0.3781 MRHILFELCFLTFLCVTFALSPDGVTLISLSKHWTFVPPSINSSWNVSESTPCSWVGIQCDQAHSVISLNLTSFSISGQLGLEIGQLNSLQTLVFSSTSLSGRIPPEIGNCSMLKYLDLSQNYFTGKIPNGLSNCSMLEHLDLSNNTLSGEIPDSFRRLKNLKNLYLHSNLILSGEIPEYLFDFPQLESLALQNNNLSGPIPMNIGNSTKLRMLYLYNNRLFGIIPTSIGNCTELEQVFLNENQLQGNLPQNLDNLQNLVYFSVKDNNLEGPISLGSGICRSLYYLDLSFNVFSGEIPIGLGNCSGLTEFYAVNSNFVGNIPIFLGSLSKLSILHLSINHLSGKIPPEISRCLSLKELHLDTNQLEGEIPSELGMLTELQILLLFYNQLTGEIPVGIWKIPSLMAIQLYNNKFHGELPLEITELKQLQYISLAVNNFSGVIPHSLGINSTLVWLDLRDNKFTGHLPPNICLGRKLERLVVGDNQLQGRIPSSIGGCTSLTRLILKSNNFTGPLPAFENNMSLGYMDINNNSISETIRSSLGNCKNLTYINLSMNKLVGLIPPELGNLVNLQELNLSYNNLEGPLPSYLSNCIKMEIFDVGFNYLNSSFPSSLIAWTGISTLILTENHFTGGIPTFLSEFQKLSDLKLGGNSFGGEIPGSIGSLQNLLYGLDLSANGLIGEIPLEIGKLKMLQRLDLSLNNLSKSIEVLGHLSSLVEVNISFNSFVGPVPNTLMKLMNSYPSSFLGNPWLCINCFSFDSLNCPKNVSLRICDHKSSHHKGLSKLKIIAISAGSSFFIILLLLCLAFMLLFGRRSLQDVRIFPGQNSSSSLLKKIFSATENLNDRYIIGKGAHGIVFKVSLNPEKVFALKKFSFANNQGQSKSMSRELETIGKIRHRNLVRLENFWLRKDYGLIMYTFMQNGSLHDALHEINPPPLSLWSVRYKIAFGIAQGLAYLHFDCDPVIVHRDIKSSNILLDSDMEPHIADFGIAKILNQSSTSVKSIVVPGTMGYIAPENAFSIVVSRKSDVYSYGVVLLELITRKKVLDASFMEGTDIVGWVRSEWKESEGIEGIVDPILGDELKVSNVRGEVEQVLLVALRCTENDPSMRPTMREVISNLIIRRSKVYGNRVIKA 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1618 1131 PRINTS Leucine-rich repeat signature 567 580 - -
Mibi01g1618 1131 PRINTS Leucine-rich repeat signature 138 151 - -
Mibi01g1618 1131 FunFam Serine/threonine-protein kinase-like protein CCR4 917 1129 - -
Mibi01g1618 1131 Gene3D Ribonuclease Inhibitor 516 766 IPR032675 -
Mibi01g1618 1131 FunFam Leucine-rich repeat receptor protein kinase EMS1 177 276 - -
Mibi01g1618 1131 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 569 1116 - -
Mibi01g1618 1131 ProSitePatterns Protein kinases ATP-binding region signature. 846 868 IPR017441 GO:0005524
Mibi01g1618 1131 SUPERFAMILY Protein kinase-like (PK-like) 827 1117 IPR011009 -
Mibi01g1618 1131 Pfam Protein kinase domain 845 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1618 1131 ProSiteProfiles Protein kinase domain profile. 840 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1618 1131 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Mibi01g1618 1131 Pfam Leucine Rich Repeat 138 158 IPR001611 GO:0005515
Mibi01g1618 1131 Pfam Leucine Rich Repeat 210 232 IPR001611 GO:0005515
Mibi01g1618 1131 Pfam Leucine Rich Repeat 114 135 IPR001611 GO:0005515
Mibi01g1618 1131 Gene3D Ribonuclease Inhibitor 22 171 IPR032675 -
Mibi01g1618 1131 SUPERFAMILY RNI-like 68 439 - -
Mibi01g1618 1131 Gene3D Ribonuclease Inhibitor 172 308 IPR032675 -
Mibi01g1618 1131 Gene3D Ribonuclease Inhibitor 309 515 IPR032675 -
Mibi01g1618 1131 SMART serkin_6 840 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1618 1131 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 20 172 - -
Mibi01g1618 1131 Gene3D Transferase(Phosphotransferase) domain 1 917 1125 - -
Mibi01g1618 1131 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 810 916 - -
Mibi01g1618 1131 Gene3D Phosphorylase Kinase; domain 1 816 916 - -
Mibi01g1618 1131 ProSiteProfiles Leucine-rich repeat profile. 690 712 IPR001611 GO:0005515
Mibi01g1618 1131 Pfam Leucine rich repeat 522 580 IPR001611 GO:0005515
Mibi01g1618 1131 SUPERFAMILY RNI-like 363 720 - -
Mibi01g1618 1131 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 473 759 - -
Mibi01g1618 1131 SMART LRR_typ_2 159 184 IPR003591 -
Mibi01g1618 1131 SMART LRR_typ_2 688 711 IPR003591 -
Mibi01g1618 1131 SMART LRR_typ_2 567 591 IPR003591 -
Mibi01g1618 1131 SMART LRR_typ_2 376 400 IPR003591 -
Mibi01g1618 1131 SMART LRR_typ_2 87 111 IPR003591 -
Mibi01g1618 1131 SMART LRR_typ_2 328 352 IPR003591 -
Mibi01g1618 1131 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 325 417 - -
Mibi01g1618 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1618 Mibi-ChrMibi01 23669535 23673019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1618 12 1113 Receptor kinase-like Gene Family AT1G73080 50.045 0.0 1012
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi01g1618 Pkinase 1.6e-41 CL0016