Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1612 ATGGCACAACTCATCAATTACCTCACATTGCTGGTGATTCTCCTCTTGTCTCTCTTCTCCATTGAAGCTTTAGCTAAGCCATCCTTGAAGATTCCTAGACGTCGATATGATCCCCAAACCATCGCTTACATAAAATCCTCTTGTCAAACCACTTTGTACCCAAAACTATGTCTTCGCTACTTATATAAATTTGCACATTCAAATATTCAAAGTCCAGAGCACTTGAGTCATGTAGCATTATCTGTGAGTCTCACACGAACACTACAAACAAGAGATTACTTGCAACAAGTGGCCAAACAATTCGATGCACTCAAGAATAGCAAGAATCCGGGAGACTATTATGATATGCAAGATTGCTTGACACAAATCAATGATAGTGTGGACGAGCTTGGCCATTCAATAAAAGAGCTTGAGAGGTTGAATAAGATCCCTTCCACTTTGATCAATGACAATGTGTTGTGGCACATAAGCAACGTTGAGACGTGGGTGAGCACTGCTCTTACGGATGCGAGCACTTGTGTGGAATATTTTCCAGGTCATAGGATGAGTAAGATGAAGGCTGCTATAAGAGGGAAGGTATTGAACGTAGAGCAAGTCACTAGCAATGCACTTGCCTTGTTTCATAGATATGCAACTATGTACCGAGAGGCAGCTGCAGCCAAGAAACCGTAA 672 0.4182 MAQLINYLTLLVILLLSLFSIEALAKPSLKIPRRRYDPQTIAYIKSSCQTTLYPKLCLRYLYKFAHSNIQSPEHLSHVALSVSLTRTLQTRDYLQQVAKQFDALKNSKNPGDYYDMQDCLTQINDSVDELGHSIKELERLNKIPSTLINDNVLWHISNVETWVSTALTDASTCVEYFPGHRMSKMKAAIRGKVLNVEQVTSNALALFHRYATMYREAAAAKKP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1612 223 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 210 IPR006501 GO:0004857
Mibi01g1612 223 FunFam Pectinesterase inhibitor 3 39 211 - -
Mibi01g1612 223 Pfam Plant invertase/pectin methylesterase inhibitor 43 206 IPR006501 GO:0004857
Mibi01g1612 223 SMART PMEI_2 39 206 IPR006501 GO:0004857
Mibi01g1612 223 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 210 IPR035513 -
Mibi01g1612 223 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 209 IPR035513 -
Mibi01g1612 223 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 206 - -
Mibi01g1612 223 Coils Coil 120 140 - -
Mibi01g1612 223 CDD PMEI-like_3 46 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1612 Mibi-ChrMibi01 23553915 23554586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1612 33 206 Carbohydrate Esterase AT3G14310 28.409 1.38e-13 67.4