Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1568 ATGAAGCCTCCTGCTGCGAAGCCGGGTTTGGAGGAACCCCAAGAGCAGATTCACAAGATTAGGATCACACTCTCCTCCAAGCACGTCAAAAATCTTGAGAAAGTTTGTGCCGACTTAGTTCGTGGTGCCAAGGACAAGAGGCTTAGGGTCAAGGGACCTGTGAGGATGCCCACTAAAGTTCTCCACATCACCACTAGGAAATCTCCATGTGGTGAAGGTACCAATACCTGGGATAGGTTTGAGCTCAGGGTTCACAAGAGAGTGATCGACCTCTACAGCTCTCCCGATGTGGTCAAGCAGATCACCTCCATCACCATTGAACCCGGTGTTGAGGTTGAGGTCACAATTGCTGATGCGTGA 360 0.5056 MKPPAAKPGLEEPQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1568 119 ProSitePatterns Ribosomal protein S10 signature. 43 58 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Mibi01g1568 119 Gene3D Ribosomal protein S10 domain 5 118 IPR036838 -
Mibi01g1568 119 FunFam 40S ribosomal protein S20 4 118 - -
Mibi01g1568 119 Hamap 30S ribosomal protein S10 [rpsJ]. 17 116 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mibi01g1568 119 PRINTS Ribosomal protein S10 family signature 19 32 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mibi01g1568 119 PRINTS Ribosomal protein S10 family signature 54 69 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mibi01g1568 119 PRINTS Ribosomal protein S10 family signature 76 90 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mibi01g1568 119 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 12 118 IPR001848 GO:0003735|GO:0005840|GO:0006412
Mibi01g1568 119 SUPERFAMILY Ribosomal protein S10 19 116 IPR036838 -
Mibi01g1568 119 SMART Ribosomal_S10_2 21 115 IPR027486 -
Mibi01g1568 119 TIGRFAM uS10_euk_arch: ribosomal protein uS10 18 116 IPR005729 GO:0003735|GO:0006412|GO:0015935
Mibi01g1568 119 Pfam Ribosomal protein S10p/S20e 21 115 IPR027486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1568 Mibi-ChrMibi01 22192246 22193604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1568 1 119 Cytoplasmic Ribosomal Protein Gene Family AT5G62300 90.756 1.18e-74 215