Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1549 ATGGAACCCTCAAGCTCTCAAAACTCATTATTCACTATTCCAAACAATTCAATGATTCAAGATTCGTCAAAGGCAGAGGAGAAGAGACCTCAAGCTGATGGATGGAGCTGGGAAGAGAATAAGGTATTTGAGAATGCTTTGGCAGAGTTTGGTTTGAAATCTGAAGTTCTAATTCCAAATCTTGCTTTGAGAATCCCAACCAAAAGCATGTCTCAGTTGGAAGATCATCTTAAAGCTCTGGAAGATGACATTAATAGGATTGACTGTTCAGATTTTGATGAAATTCTCGACCTTTTAAAGAGTGACACAGAAGATGATTCATCAAGCAAAGCCATTAGCATGATGAAGAAGAATGAAGAAGAAGAAGAAGCTTCTAAGAAATTATCAGAAGCAAGATCTGTTCCTATTCAACGTAGAAGAGGAATTCCTTGGACTAAGACTGAACATGAAATGTTCTTGCTGGGACTTGAACGCTATGGAAGAGGTGATTGGAGGGGCATCTCTAGGCACCTAGTGCCATCTAAAACTCCAACTCAAATTGCAAGTCATGCTCAAAAGTACTTTCTCAAACTCAAAAATCCCAAGTCTCGTCTAAGGAAAGATGGATCACTCATGCGAACAGTGGATGATTCACAGAAGCCAACGGTAGAAAATGTGCAACCCGCAATCTCTGATGACAAGAAGGCTCCATGA 693 0.4012 MEPSSSQNSLFTIPNNSMIQDSSKAEEKRPQADGWSWEENKVFENALAEFGLKSEVLIPNLALRIPTKSMSQLEDHLKALEDDINRIDCSDFDEILDLLKSDTEDDSSSKAISMMKKNEEEEEASKKLSEARSVPIQRRRGIPWTKTEHEMFLLGLERYGRGDWRGISRHLVPSKTPTQIASHAQKYFLKLKNPKSRLRKDGSLMRTVDDSQKPTVENVQPAISDDKKAP 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1549 230 ProSiteProfiles Myb-like domain profile. 143 188 IPR001005 -
Mibi01g1549 230 MobiDBLite consensus disorder prediction 107 132 - -
Mibi01g1549 230 MobiDBLite consensus disorder prediction 1 33 - -
Mibi01g1549 230 MobiDBLite consensus disorder prediction 198 230 - -
Mibi01g1549 230 Coils Coil 70 90 - -
Mibi01g1549 230 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 141 190 IPR006447 GO:0003677
Mibi01g1549 230 SUPERFAMILY Homeodomain-like 34 87 IPR009057 -
Mibi01g1549 230 Coils Coil 114 134 - -
Mibi01g1549 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 136 192 IPR017930 -
Mibi01g1549 230 FunFam transcription factor MYB1R1 142 193 - -
Mibi01g1549 230 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 30 197 IPR043363 -
Mibi01g1549 230 ProSiteProfiles SANT domain profile. 144 192 IPR017884 -
Mibi01g1549 230 Gene3D - 27 93 - -
Mibi01g1549 230 SUPERFAMILY Homeodomain-like 137 193 IPR009057 -
Mibi01g1549 230 Pfam Myb-like DNA-binding domain 143 188 IPR001005 -
Mibi01g1549 230 Gene3D - 142 193 - -
Mibi01g1549 230 MobiDBLite consensus disorder prediction 1 21 - -
Mibi01g1549 230 CDD SANT 143 188 IPR001005 -
Mibi01g1549 230 SMART sant 31 83 IPR001005 -
Mibi01g1549 230 SMART sant 140 190 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1549 Mibi-ChrMibi01 21858740 21863052 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi01g1549 Myb_DNA-binding 6.4e-10 CL0123