Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1547 ATGAGTCATCAGGGGAATAATTTGGGAGGGCAGTTTGGGGACACAACATACACAAAGGTGTTTGTTGGAGGATTGGCCTGGGAGACTCACAAGGACACCATGAAGAAATACTTTGAGCAGTTTGGTGATATCTTGGAGGCTGTCGTCATCACTGACAAGGCTACTGGCAAATCTAAAGGCTATGGCTTCGTAACTTTCCGGGAGCCAGAAGCCGCCATGAGAGCTTGTGTGGATGCTGCTCCTGTGATTGATGGAAGGAGGGCCAACTGCAACCTTGCTTCTTTGGGTGTCCAGAGATCCAAGCCCTCTACCCCTAAGCATGGAGGAGGAGGAGGCAGGAACTTTAGGGTGATGGGTTCGTTTCAGACAGGATTTGGAGGAGTAGGATCCACTTTTCCTTCTGCAGCTGCACCAACACTTCCTCATTATGCTCTCCAGCAAGGAACTCCTTATAATCTTTATGGGTACTCTCCATACTCACCAGATTACACTTACCCTACGGGTTACTATAGTGTGTATGGAGGGGCAACCCAGTATCCAGTGTATGGAACCGGACCAGGAGGCATGATGAGCAGTGCGGCGGCGGCGGCGGCGGCCACCGCCATCTACCCGTATCTGCAGTTTGGAGAAGGTAGTGGCAACGGCGTAACCGGCGGCTACACTTCCGGGCAGGGCTATGGTGTGTACTACCCACCACATCTCTTTCAGTACTCTCCCATTACTTCATCTGCTGGTGGTTATGCACAGCACTATGGTCCACCTATGTCTCTTGCACCTTCTCCAGCTTTGCAATCAGTGTGTTTTGCTGTGCCACAGGCGTGA 822 0.517 MSHQGNNLGGQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGKSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGRNFRVMGSFQTGFGGVGSTFPSAAAPTLPHYALQQGTPYNLYGYSPYSPDYTYPTGYYSVYGGATQYPVYGTGPGGMMSSAAAAAAATAIYPYLQFGEGSGNGVTGGYTSGQGYGVYYPPHLFQYSPITSSAGGYAQHYGPPMSLAPSPALQSVCFAVPQA 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1547 273 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 75 IPR000504 GO:0003723
Mibi01g1547 273 PANTHER BOULE-RELATED 9 255 IPR037366 -
Mibi01g1547 273 CDD RRM_RBM24_RBM38_like 18 93 - -
Mibi01g1547 273 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 12 99 - -
Mibi01g1547 273 Gene3D - 3 115 IPR012677 -
Mibi01g1547 273 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 102 IPR000504 GO:0003723
Mibi01g1547 273 SUPERFAMILY RNA-binding domain, RBD 14 118 IPR035979 GO:0003676
Mibi01g1547 273 SMART rrm1_1 19 91 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1547 Mibi-ChrMibi01 21810052 21816099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1547 14 192 C2H2 Transcription Factor Family AT2G19380 28.421 1.06e-12 65.9