Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1541 ATGTCTCAAGAGAGTTCAGACCCTTCTTCTTCTTCTTCTTGCTGCTCAAGATCGGATCATTTGAATTCAGCTTCAGCTGAGCTCAAGCTTTACAGAGCCTTCATTTTCTCTGTTCCTATCTTCTTCACTTTCATCCTCCTCTTTCTCTTCTACGTCTTTTACCTTCGTCCTCGTAGGGTTGATTGGTCTTCTCTTAGGATGAGAGCCTTAGCCGCTGCTGAGGATAATGGCCCTAACTCCAGGCCTGAATTGGGTTTGAAGAAGGAACTGAGGGAGATGCTGCCGATTATTGTATTCAAAGAAAGCTTCTCAGTTAAAGATACACAATGCTCCGTTTGCCTTGTGGACTACCAACCAGAAGACAAGCTTCAACAGATACCTGCATGCGGCCACACATTTCACATGAGCTGCATTGATCTTTGGCTCACCAACCACAGTACCTGCCCTCTCTGCCGCTTGTCCCTTCTAGCTTCTGCTAAATCTTCAACTGAGACATCTAATTTACAGAGACCATCTGGCGATGAAGAAACGCCAGGCACACAATCCTCTGAATCAAGACCTACAACGAATCCAGATAATAGTGCTGCTCAAAGTTGCTCTAGAGATAATGCAAGCAGTGCCCTCTGCATTGATGTTGAAAGAGGAAATGCAGAAAGCAGTTAG 663 0.4525 MSQESSDPSSSSSCCSRSDHLNSASAELKLYRAFIFSVPIFFTFILLFLFYVFYLRPRRVDWSSLRMRALAAAEDNGPNSRPELGLKKELREMLPIIVFKESFSVKDTQCSVCLVDYQPEDKLQQIPACGHTFHMSCIDLWLTNHSTCPLCRLSLLASAKSSTETSNLQRPSGDEETPGTQSSESRPTTNPDNSAAQSCSRDNASSALCIDVERGNAESS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1541 220 SUPERFAMILY RING/U-box 94 157 - -
Mibi01g1541 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 157 IPR013083 -
Mibi01g1541 220 PANTHER OS11G0150450 PROTEIN 42 195 - -
Mibi01g1541 220 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
Mibi01g1541 220 CDD RING-H2_EL5_like 109 152 - -
Mibi01g1541 220 FunFam RING-H2 finger protein ATL7 76 157 - -
Mibi01g1541 220 MobiDBLite consensus disorder prediction 162 203 - -
Mibi01g1541 220 SMART ring_2 110 151 IPR001841 -
Mibi01g1541 220 Pfam Ring finger domain 109 152 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1541 Mibi-ChrMibi01 21718800 21721198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1541 23 219 C3H Transcription Factor Family AT4G10150 52.736 3.53e-66 202