Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1493 ATGGGTAGTCGTCGATCTCTGTTAATATTCTTCTTCTTAACTTTCTTCCTCTTAGCTTGTCTTCTTCCAACAGCCACATCAAGAAGATCAAGAAGAAGACCAAAACAGTCTTTGTCTAAGAACATTCAGTGGTGGTGCGATCAAACCCCACATCCAGGACCATGCAAATTCTACATGATGAACCACCATGGCCACACATTGAAGCACAAGTCAAACTTCAGAGTCAACCTTGTTCAATTAGCTCTCAACCAAGCACAACAAATGAAATATGAAGCTAATCACTATGCCCAAAACGACACCGTAGAAGGGAAGAAGCTGAAAGCCGTGTACGATGCTTGCTTGAAGCTCTATGATAACACCATCTTCCATCTAAACCGAACCCTGATAGGGATCGGACCAAAACGACTTCGTGGTTCACCTGGTCGATGTTCCAGCTTGGACGCTCAAACATGGCTCAGCACAGCCCTCACTAACATCCAAACATGCAAAAACGGAGCTAAAGACTTAAAGCTTGATGTGCCAAAACTTTCAGAGCCTAATTCTTTTTGTTACAATGTGTCCAAAATGATAAGCAATAGTTTGGCCATAAACGCAGCGTTTTTGACAAAACCTGAGAGACAAGACCTGATCATGGGTGAGAATAGCAATAATAATGAGTTTCCTAAGTGGTTTTCTAGGAATGAGAGGAAGTTGGTGACGGTGTCGGCGTCGAGGATAAAGGCGAATCTGGTGGTGGCGAAGGACGGTACCGGGCATTTCAAGACGGTGCAGGCAGCGATAGATGCGGCGGCGAAGAGGAAGTACAAGACGAGGTTTGTGATAAGAGTGAAGAAAGGGGTTTACAAAGAGAACATAGAGGTTGACAAGAGTAATGGTAATGTAATGTTGATTGGTGAAGGTTTGAAATATAGTGTGATCACAAGTTCCAAGGGTACTTCAGATGGAATTACCACCTATAGTACTGCCACTGCTGGCATAGATGGGCCTAACTTCATTGCTCGTGACATATCATTTGTCAACACTGCGGGTCCTCATAAGGGACAAGCAGTAGCACTCCGATCAGCCTCCGATCTCTCTGTATTTTACCGATGTGGCATTACAGGTTATCAAGACACAGTCATGGCTCATGCACAACGTCAATTTTACAAACAGTGCTACATTTTTGGTACCGTAGACATCATATTTGGCAATGCAGCTGCAGTTTTTCAAAGCTGTGTCATTCTCGTGAGGAGGCCATTATCAGGCCAAGCCAATATGATCACAGCACAAGGTCGAGGTGACCCTTTCCAAAACACTGGTACCACATTACAAAATTGCATAATTAAAGCTGCACCAGACCTTAAACCTGTCATTAGCTCTGTTACAACCTACCTTGGTCGGCCATGGCAAGAATACTCAAGGGTTGTGGTAATGAAGTCTTACATTGACTCATTGGTAAGCCCATTGGGATGGTCTAAATGGGGAAATAGTGATTTTGCTTTAAGTACACTGTATTTTGGGGAATATAAGAACTTTGGACCAGGTTCATCCACAACAAATAGGGTGAAATGGAAAGGATATCATGTTATAACTAGTGCAACTGAAGCATCTAGCTTCACTGTGAATGGCCTCATTGCTGGTAGTACATGGTTGCCTTCGACTGGAGTTCCATTTACTTCTGGTTTATAG 1668 0.4341 MGSRRSLLIFFFLTFFLLACLLPTATSRRSRRRPKQSLSKNIQWWCDQTPHPGPCKFYMMNHHGHTLKHKSNFRVNLVQLALNQAQQMKYEANHYAQNDTVEGKKLKAVYDACLKLYDNTIFHLNRTLIGIGPKRLRGSPGRCSSLDAQTWLSTALTNIQTCKNGAKDLKLDVPKLSEPNSFCYNVSKMISNSLAINAAFLTKPERQDLIMGENSNNNEFPKWFSRNERKLVTVSASRIKANLVVAKDGTGHFKTVQAAIDAAAKRKYKTRFVIRVKKGVYKENIEVDKSNGNVMLIGEGLKYSVITSSKGTSDGITTYSTATAGIDGPNFIARDISFVNTAGPHKGQAVALRSASDLSVFYRCGITGYQDTVMAHAQRQFYKQCYIFGTVDIIFGNAAAVFQSCVILVRRPLSGQANMITAQGRGDPFQNTGTTLQNCIIKAAPDLKPVISSVTTYLGRPWQEYSRVVVMKSYIDSLVSPLGWSKWGNSDFALSTLYFGEYKNFGPGSSTTNRVKWKGYHVITSATEASSFTVNGLIAGSTWLPSTGVPFTSGL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1493 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 200 IPR035513 -
Mibi01g1493 555 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 197 IPR006501 GO:0004857
Mibi01g1493 555 CDD PMEI-like_3 44 202 - -
Mibi01g1493 555 Pfam Pectinesterase 242 540 IPR000070 GO:0030599|GO:0042545
Mibi01g1493 555 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
Mibi01g1493 555 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Mibi01g1493 555 SUPERFAMILY Pectin lyase-like 237 554 IPR011050 -
Mibi01g1493 555 FunFam Pectinesterase 236 555 - -
Mibi01g1493 555 Pfam Plant invertase/pectin methylesterase inhibitor 41 196 IPR006501 GO:0004857
Mibi01g1493 555 SMART PMEI_2 37 196 IPR006501 GO:0004857
Mibi01g1493 555 PANTHER PECTINESTERASE 17 545 - -
Mibi01g1493 555 Gene3D - 235 555 IPR012334 -
Mibi01g1493 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 200 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1493 Mibi-ChrMibi01 20950853 20953665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1493 39 555 Carbohydrate Esterase AT5G51500 55.000 0.0 572