Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1492 ATGAATTCGTTTTCTTATGTGCCACCTGGATTTAGATTCCATCCAACAGATGAAGAACTTGTTGATTACTACCTGAGGAAGAAAGTCACTTCAAGAAGGATCGACCTTAATGTCATCAAAGATGTTGACCTCTACAAAATTGAGCCATGGGACCTTCAAGAGATTTGCAGGATAGGAACAGAAGAGCAAAATGAATGGTATTTTTTCAGTCATAAAGACAAGAAATATCCAACTGGGACTCGAACAAATAGAGCCACAGCTGCTGGATTCTGGAAAGCAACAGGAAGAGATAAGGCTATCTATTCCAAGCATGATCTCATTGGCATGAGGAAAACCCTAGTTTTCTATAAGGGTCGAGCCCCTAATGGACAGAAATCTGATTGGATTATGCATGAGTATCGTCTTGAAACTGATGAAAATGGAACCCCACAGGAAGAAGGATGGGTTGTTTGTAGAGTGTTCAAGAAGAGAATAACAACCATAAGGAAAGTGAGTGAGCATGACTCTCCTTGTTGGTATGATGACCAACAAGTCTCAACTTTCATGCAAGACTTGGACTCACCAAAGCAACAAAATCCCCATCCATCTCATCATCATCATCAACCTAATTTGATGTACCACCAAATCCCTATCAACAATTATCCTTGCAAGAAAGAGCTGGACCATAATAATCCTCATCATCACATGCCATTGCTTCACCAACTTCAAACTCGCCACCACTTCCTCCCTCAGCTTCCGCTCCTCGATTACCAGAATCCAAAATTGCTTCAGTCTTCGGCTTCTGCAGCCGTAAACCCTAGCAACAACAACTTAATGGCACCATATGGCCTTGATGTGATGAACAATGCTATGGCAGAAGATCATCAAGAAACTTTTCAGGCTGCTGTTTATGGCGGTAGTAGCCAAGAACAAGTGGCGGTTGACGATGAACAAGTGACTGATTGGCGAGTACTTGACAAATTTGTCGCTTCACAACTTAGTCAAGAAGATGTGCCTGGTAATAATAAGGACCACAACAACAACAATAATAATGCAGGCACAAGCAGCAGCAGCAACAATATTTTTCAGGCCATGGACAATATTGCTAGTAGTGTACAATTCAAACCATCAAATTTGGAAAAGCAAGAAATAATGGTTCCAGAAAATGCCTCAACTACTTCAACCTCAAGTTGCCCAATTGATTTGTGGAGATAG 1194 0.4129 MNSFSYVPPGFRFHPTDEELVDYYLRKKVTSRRIDLNVIKDVDLYKIEPWDLQEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTIRKVSEHDSPCWYDDQQVSTFMQDLDSPKQQNPHPSHHHHQPNLMYHQIPINNYPCKKELDHNNPHHHMPLLHQLQTRHHFLPQLPLLDYQNPKLLQSSASAAVNPSNNNLMAPYGLDVMNNAMAEDHQETFQAAVYGGSSQEQVAVDDEQVTDWRVLDKFVASQLSQEDVPGNNKDHNNNNNNAGTSSSSNNIFQAMDNIASSVQFKPSNLEKQEIMVPENASTTSTSSCPIDLWR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1492 397 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Mibi01g1492 397 FunFam NAC domain-containing protein 16 160 - -
Mibi01g1492 397 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Mibi01g1492 397 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Mibi01g1492 397 MobiDBLite consensus disorder prediction 327 352 - -
Mibi01g1492 397 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Mibi01g1492 397 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1492 Mibi-ChrMibi01 20920182 20922054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1492 1 397 NAC Transcription Factor Family AT1G12260 50.485 1.11e-127 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi01g1492 NAM 5.3e-38 No_clan