Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1479 ATGGACCTGAAGTCGAATCATACTCCTGTTCTTACTGATACTGCACCCATAACAAAATCGAGATTGGGTGTACACTCCAGTCTGTTGCCTTATTCTCCTACAGGGGCAGCTTTTCCACCTGGCCTGCTTCTGACAATCCCTAGGAAGAAGATAGGAATTCTTGATGATGTTCGCCATAGTAGTTTGCTGGATGCCATGAAATCATCTTCTCCTACAGCCACGAAGATAACAAAGGATATTAATCATGGTTTTGCATCATCTGATGCTGATAATGCTTACAGTACCTGGCTGCTAAAGTATCCATCAGCACTTGCGTCTTTTGAGAAAATTGCAAACCGTGCAAAAGGCAAGAGAATAGCATTGTTTTTGGATTATGATGGAACTCTTTCACCAATTGTGGATAATCCTGACTGTGCTTATATGTCTGACAGTATGCGTGCTGCTGTTAAAAAAGTGGCAGAGCTTTTTCCCACTGCAATAATTAGTGGAAGAAGCCGTGACAAGGTACATGAATTTGTAGGACTAACTGAACTCTATTATGCTGGTAGCCATGGGATGGACATCATTGGTCCTGTGAGACAATCTGTATCTGAGAACCATCCTAATTGCATTAGATCTGCTGACAATCAGGAAAAGGAAGTTAATTTATTCCAGCCTGCTGCTGAATTCTTGCCCATGATTGATGAGGTTCGTAATTCCCTTGTTGAATGTATAAAAGACATTAAAGGAGCGACAGTTGAGAACAATAAATTTTGTGTCTCTGTACACTATCGCAATGTTGAGGAGAAGAATTGGAAAATAGTGGGGCAAAGAGTCTTTGATATTCTGAAGGAGTATCCACGGTTGCGATTAACCCATGGGCGCAAGGTTTTAGAGGTCCGTCCGGTGATCAATTGGGATAAGGGGAAGGCTGTCACATTTTTACTTGAGTCACTTGGGCTTAGCAATTGTGATGATGTGCTGCCTATATATGTTGGTGATGATCGGACTGATGAAGATGCTTTTAAGGTTTTGAGGGAGGGAAATAAAGGTTTTGGGATCCTAGTTGCTTCTGCACCGAAGGAAAGTAATGCAGTCTACTCTCTTCGTGACCCAGCAGAGGTCATGGAATTTCTAAAGTCTCTTGCGGTTTGGAAGTCAGGCCTCCTGAAAAGTTACATATAG 1164 0.4218 MDLKSNHTPVLTDTAPITKSRLGVHSSLLPYSPTGAAFPPGLLLTIPRKKIGILDDVRHSSLLDAMKSSSPTATKITKDINHGFASSDADNAYSTWLLKYPSALASFEKIANRAKGKRIALFLDYDGTLSPIVDNPDCAYMSDSMRAAVKKVAELFPTAIISGRSRDKVHEFVGLTELYYAGSHGMDIIGPVRQSVSENHPNCIRSADNQEKEVNLFQPAAEFLPMIDEVRNSLVECIKDIKGATVENNKFCVSVHYRNVEEKNWKIVGQRVFDILKEYPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLSNCDDVLPIYVGDDRTDEDAFKVLREGNKGFGILVASAPKESNAVYSLRDPAEVMEFLKSLAVWKSGLLKSYI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1479 387 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 380 IPR044651 GO:0004805|GO:0005992
Mibi01g1479 387 FunFam Trehalose 6-phosphate phosphatase 119 210 - -
Mibi01g1479 387 Gene3D - 119 214 IPR023214 -
Mibi01g1479 387 Gene3D - 217 383 IPR023214 -
Mibi01g1479 387 SUPERFAMILY HAD-like 120 377 IPR036412 -
Mibi01g1479 387 FunFam Trehalose 6-phosphate phosphatase 226 385 - -
Mibi01g1479 387 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 121 339 IPR006379 -
Mibi01g1479 387 CDD HAD_TPP 120 370 - -
Mibi01g1479 387 TIGRFAM T6PP: trehalose-phosphatase 116 376 IPR003337 GO:0003824|GO:0005992
Mibi01g1479 387 Pfam Trehalose-phosphatase 122 365 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1479 Mibi-ChrMibi01 20348394 20351267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1479 115 376 Trehalose Biosynthesis Gene Families AT1G70290 25.177 3.04e-09 57.0