Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1434 ATGTCATTAAGAACTGGATTTGATGAAGAAGAAGAAGAACAAGGAAGATGGGAAGATATGCCACAAGAATTGCTTTGGGACATAATAAAGAGGGTGGAAGAGAGTGAGACATGTTGGCCTTCACGTCTTATTCAGTCATGTGCTTCAGTTTGTAAGTCATGGAGAGCAATTACAAAGGAGGTTGTTAAGACTCCTGAGCTATCTGGAAGGCTCACTTTTCCCATCTCATTGAAACAACCAGGACCTCGAGATTCTCATATGCAATGTTATGTCAAAAGGAATAGAGAAACTTCTACTTTTTTGTTGTACTTGGGTCCAGAGCCATCAGAGAATAAGAAGGATAAGTTGTTGTTGGCGGCCAAAAGAAAACAAAGGATAAGAAATACAAAATATGTTATATCTTTAGTTGCTGATGACTTCCGTCGGACCAGCAAGTCTTATGTTGGAAAAGTCAGGTCTAATTTCTTGGAGTACAAGTTCACTATATATGACACTCAACCTCCACCACCACGACATGAAGCTGCTGCTAGAAAAGTAGTTCAAGCCAAGAAGATGTCTATACGTAAGTGCAACAACGTTGGTACCATTAAGTACAATACCAACTTGATTCACAAATGCAGATTCCACAGAATCAAAGGTCCAAGGAAAATGAAGTGCGTCATGAAGAAGATGAACCCATCATCATCAACAAGTACTATGGCAATGGAGCCTCTCGTGAAAATTAAAAGCAAGGATCCCATATGGGATGAAGAATGCCAACACTGGCACCTCAACTTCAGACATCATAGTACTTTGGCATCTGATAATATCCAGCTTGTTGCTGATGATGATGATGATGAAGAAGAAAAAGAACAAGAAAAAGTGATATTGGAATTTGCTAAGATAGAAGAAGACGTGTTTGTTATGGATTACTGTTATCCACTCTCTGCATTTCAAGCCTTCGCTATCTGTCTCAGCAACTTTGACGCTAAACCAACCTCTGATTGA 987 0.3951 MSLRTGFDEEEEEQGRWEDMPQELLWDIIKRVEESETCWPSRLIQSCASVCKSWRAITKEVVKTPELSGRLTFPISLKQPGPRDSHMQCYVKRNRETSTFLLYLGPEPSENKKDKLLLAAKRKQRIRNTKYVISLVADDFRRTSKSYVGKVRSNFLEYKFTIYDTQPPPPRHEAAARKVVQAKKMSIRKCNNVGTIKYNTNLIHKCRFHRIKGPRKMKCVMKKMNPSSSTSTMAMEPLVKIKSKDPIWDEECQHWHLNFRHHSTLASDNIQLVADDDDDEEEKEQEKVILEFAKIEEDVFVMDYCYPLSAFQAFAICLSNFDAKPTSD 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1434 328 Gene3D - 9 67 - -
Mibi01g1434 328 Gene3D Tubby Protein; Chain A 74 328 IPR025659 -
Mibi01g1434 328 PANTHER TUBBY-RELATED 5 325 - -
Mibi01g1434 328 SUPERFAMILY F-box domain 6 59 IPR036047 GO:0005515
Mibi01g1434 328 Pfam Tub family 77 322 IPR000007 -
Mibi01g1434 328 Pfam F-box domain 17 62 IPR001810 GO:0005515
Mibi01g1434 328 PRINTS Tubby superfamily signature 241 258 IPR000007 -
Mibi01g1434 328 PRINTS Tubby superfamily signature 147 171 IPR000007 -
Mibi01g1434 328 PRINTS Tubby superfamily signature 285 304 IPR000007 -
Mibi01g1434 328 PRINTS Tubby superfamily signature 306 328 IPR000007 -
Mibi01g1434 328 PRINTS Tubby superfamily signature 131 147 IPR000007 -
Mibi01g1434 328 SUPERFAMILY Tubby C-terminal domain-like 65 325 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1434 Mibi-ChrMibi01 19125041 19127173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1434 14 325 TUB Transcription Factor Family AT2G18280 47.592 1.20e-101 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Mibi01g1434 Tub 8.9e-67 CL0395