Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1393 ATGGCAACTTGTTGTCCAAGTTGCTCCAAATTCACACCAAGTTCTTTTCTTCCACACTCCTCTCTCTCACCTTCCTTCTTCACTGCCCCTTCTAGTTCTGTAAGGCCCGTTAATCTCCGTGGCTTTTATAATTGTCAAAGACTTTGGCTTTGGTCAACCCATCGTTGTGTTCCTCTACTAGCTACAACTTCGTGTAGCAATTTTGAGTCTGGAGAAATGCTAGAAGCCCAGAATGCTGTTTCGAAGTTTCTTCAAGAATTAGGGGTAAGTGAGGAGGAATCTGATTCTATTGTGTCTAATTCACCAAAGTATTTGAGGATGCTGGTTGATGAAGTTCGGGAGAAGGATGAACTTTCAATGTGGGAGAAGCAGATTGATGGGTTCCAGGAGAAAGTGCTTCACATTGCTAGGGAGAAGGGTGATAATGGTAAAGTTGCTTACTTGGAGAGTCTTGGTTTGAGCCTCTCTTCAGCTATGAATGTGGCCAGATATCTGTCTGCAGAAACACTTGCAAATCTCATTCTTAAGGTTAAGTGTATGAAGGAACTGTTCTTTTCTGGCAGTGAAAGTCCCGAGTTCCCGGTCAGCAGAGTTCGCATTATGATGATGCAGATATCAATTCCTATTGATGAGGATCTGCAGCAGACATTTTCCTTTTTTGAAAAGGTTGAAGCAAGGCGTGGAGGTTTGAACATGTTGAATTCCAGTGATGCTGCTTTTGATTATTTAATTGAATCATTTCCCCGTCTACTTTTGTTATCCGTAAAATCTCACATGAAACCGTTAGTTGAGTTTCTTGAGAGTGTTGGAATCCAAAGAGGTCGCATCAGAAATATACTGTTGACTTTTCCTCCCTCTTTGCTGTGGAATATTGAAGTATTTAAAACTCGATTACTAGCCTTGAAAGAGATTGGTGGTGTAAATGAAAATTATGCTAAGATGCTGCTAAAATATCCATGGATACTATCTAAAAGCATTCAAGACAATTATCAGGAGGTCCTCTCATTGTTTGACTCAGAGAAGGTTCCCAAGGCATTCGTTAATCGTGCAATCAAAAGCTGGCCCCATATATTGGGTTGTTCGTCTAGCAAGCTAAAGCTGGTGGTTGATCGGTTTGGTGAAATGGGAGTTCAGCACAAGAAGTTGGGTAAAGTTATTGCTAAAAGTCCTCAACTATTGTTACAGAAGCCGCAAGACTTTCTCCAGGTTGTTCTGATCTTTAAAACAATGGGGTTTGATATACTAACAATCGGGGAAATACTGGTTCGCTGTCCTGAAATCTTTGCTGCTTGCCCTACGAAAACTCTCCAGAGAAAGATTAAGTTCCTGCATGGTATTGGTGTTTCTGAGGTTCACCTTCCTCGGGTTATAAAAAAGTATCCAGAACTTCTCGTGACCGACCCAGACAGAAATATGCTACCTAGGTTGATTTTCTTGATGAAGTTAGGACTATCTAAGAGTGACATAGCATTCATGGTACGATCATTTTCTCCTCTGCTTGGATACAGCATTGAGGAAGTTCTGAGACCGAAAGTAGAATTCCTGGTGAACACAATGGAGAGGCCAGTGAAGGAATTGGTGGCGTACCCCAGGTATTTTAGCTATTCTTTAGAGAAGAAGATAAAGCCTAGATATTGGGTTCTTAAGGAAAAGAATATTGAGTGTAGTTTGAAGGATATGTTGGCAAAAAATGACGAAGAATTTGCTGCTGACTATATTGATCTCCCATCATCATCAACTCATTCTTGA 1749 0.4088 MATCCPSCSKFTPSSFLPHSSLSPSFFTAPSSSVRPVNLRGFYNCQRLWLWSTHRCVPLLATTSCSNFESGEMLEAQNAVSKFLQELGVSEEESDSIVSNSPKYLRMLVDEVREKDELSMWEKQIDGFQEKVLHIAREKGDNGKVAYLESLGLSLSSAMNVARYLSAETLANLILKVKCMKELFFSGSESPEFPVSRVRIMMMQISIPIDEDLQQTFSFFEKVEARRGGLNMLNSSDAAFDYLIESFPRLLLLSVKSHMKPLVEFLESVGIQRGRIRNILLTFPPSLLWNIEVFKTRLLALKEIGGVNENYAKMLLKYPWILSKSIQDNYQEVLSLFDSEKVPKAFVNRAIKSWPHILGCSSSKLKLVVDRFGEMGVQHKKLGKVIAKSPQLLLQKPQDFLQVVLIFKTMGFDILTIGEILVRCPEIFAACPTKTLQRKIKFLHGIGVSEVHLPRVIKKYPELLVTDPDRNMLPRLIFLMKLGLSKSDIAFMVRSFSPLLGYSIEEVLRPKVEFLVNTMERPVKELVAYPRYFSYSLEKKIKPRYWVLKEKNIECSLKDMLAKNDEEFAADYIDLPSSSTHS 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1393 582 SMART mt_12 523 554 IPR003690 GO:0003690|GO:0006355
Mibi01g1393 582 SMART mt_12 312 343 IPR003690 GO:0003690|GO:0006355
Mibi01g1393 582 SMART mt_12 348 378 IPR003690 GO:0003690|GO:0006355
Mibi01g1393 582 SMART mt_12 454 485 IPR003690 GO:0003690|GO:0006355
Mibi01g1393 582 SMART mt_12 418 449 IPR003690 GO:0003690|GO:0006355
Mibi01g1393 582 SMART mt_12 277 307 IPR003690 GO:0003690|GO:0006355
Mibi01g1393 582 SMART mt_12 383 413 IPR003690 GO:0003690|GO:0006355
Mibi01g1393 582 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
Mibi01g1393 582 SMART mt_12 490 522 IPR003690 GO:0003690|GO:0006355
Mibi01g1393 582 Gene3D Transcription termination factor 3, mitochondrial 364 578 IPR038538 -
Mibi01g1393 582 PANTHER CGI-12 PROTEIN-RELATED 145 377 IPR003690 GO:0003690|GO:0006355
Mibi01g1393 582 FunFam Mitochondrial transcription termination factor family protein 363 576 - -
Mibi01g1393 582 Pfam mTERF 263 569 IPR003690 GO:0003690|GO:0006355
Mibi01g1393 582 Pfam mTERF 77 297 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1393 Mibi-ChrMibi01 18318360 18323586 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mibi01g1393 mTERF 4.1e-95 No_clan