Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1389 ATGGAGAGAGTCCGTGGCATAGGAGATGAGTTAAAGAAGTCTCCATCGCTGCATTGCTCATCTTCAGCTGTTGCTGTAGCTATCAAGGGTAACAATAAAAGCAAGCTTATGGTGCAATGGGCACTGGATACTTTTGTTCCTGAGGGAAGAATTGTGTTTAAGCTGATACATGTACATTCAGCAGCTTCTTTTAAGAAGGAAATGGAGTGGCAGACAAGTGCAATGCTCCTACCTTACAGGAAAATGTGTGAGCAGAGAAAGGTTCATGTTGATATTGTAGTGATTCAATCTGAGGATGTCGAAACTGCAATAGCAGAAGAAGTTGCTAAGAGCACTATAACCAACCTAGTTATAGGAGCTTCATCTCATGCAATTTTTACTAGTAAACTTAAGGGCTTATCTGCAAAAATCTCATCACGCACTCCAAGATTTTGTACAGTTTATGCTGTTTCCAAAGGAAAACTGTTTTCTTCACGGCCATCAGACATAGAGATTGATGAAAGCTTAATAGATGACAGCAGTGAAACCAGTTGTTCAACTTCAACCAATAGCTCATTGAACTCTGCGTCCACCTCTCAGATAGACTATGGCTCAGTCGGATCGTATGCTCCTATAAATTCGTCTTCCCTAGCGGCACAGAGATATCAAGCTCTTTCAACCATTAATCAGACCCGTCACAGCTCAAAACCTGGTTTAATTGAACATAACCACTCTAGGAGCCATTCTCTAGATCTTGGCATAGAGCCAACTGCTGTATATTCTTCTACCAGAAACTCAGATATTGACTATGCTTTGAGCCGGGCCTCTAGCCGTAAAAGCAATCTATCAGATGGTGAATTTTGGAATTATTATCAAAATCCCACTATGGATGTATCGTTGGCAACTGTGCTGCCTGATAAACAGGAAAATTTTAGCCTTGAGCTGGAAAAGTTGAGAATTGAACTAAAGCATGCCCAAGGAATGCACATGGTAGCTCAAAGACAGAATATTTATGCATCACAAATGCTGAACAATCTAAGTAAGAAGAGAATGGAGGAATCCATGAAATTGAAGGAAATTAGTGCTAAGGAGGACATGGCCCAAAAATTAGTAATAAAGGAGAGAGAGAAATGCGAGGCAGCAGAAAGAGAAGCTGCTTATCTGAAAAGAAGTTCTGAGGAGGAAGCCATTGAAAAAAGTGAGGCAGAGAAGAAAGCTGTGGAAGCTTGCAGAAGGAATGAAAGACTAGAGGATGCTCTAAGTGGTTCCATGCTTCAATATAAGAAGTTTGCATGGCATGAAATTGTTTCAGCTACCTCATCATTCTCTGAAGAGCTAATAATTGGAAAGGGAGCTTGTGGGACAGTTTACAAGTGCCATTTGTATCATACTCTGGTCGCGGTCAAAATTCTCCATTCTAATGAGAATCACATTGTCAAGCAACTCCAACAAGAGCTAGAAATATTGAGCAGAATTCGTCATCCAAATTTACTTCTCCTTCTTGGGGCATGCCCTGATCATGGATGCCTTGTGTATGAGTACATGGAGAATGGTAGTTTAGAGGACAATTTACTCCAAAGTAAAAGTAATATCTCAATTCCATGGTTCAAGAGGTTCCAAATTGCATGGGAAGTAGCCTCTGTTCTTGCCTTTCTTCATAGCTCGAATCCTAGACCTATCATCCATCGTGATTTGAAACCGGCAAACATCTTGCTGGATCGAAATCTCGTGAGCAAAGTTGGGGATATTGGCCTTTCTACATTACTCCATTCAGATACCTTGTCTACAATGTTCAAGGACACAGAGCCAGTTGGGACACTCTCCTACATAGATCCTGAGTACCAAAGGACAGGGGAAATATCTCCCAAATCTGATGTTTATGCTTTTGGAATGGTGATCCTACAGTTGTTAACTGCCAAACCAGCTAGAGCACTCACACATTTAGTAGAAACAGCAATTGACAAGGGAAATTTAGCAGAAATGTTGGATCCTAAGGCAGGGGATTGGCCACTTAAGGAGACTTTGGACTTAGCTCAATTAGGCCTAAAATGTGCAGAACTTCGGCGTAGAGACCGGCCTGATTTGAAAGATCGTGTACTTCCCATATTGGAGAGATTAAAAGTAGTTGCTGATACGGCTCAACATTCTGGTGCAATTATTACTCTTAAATCCAGACCTCCTAATCACTTTATCTGCCCAATACTTCAGGATGTGATGGATAATCCTTGTGTTGCTGCTGATGGTTATACTTATGATCACAAAGCAATTGTAACATGGCTACAAACCAATGACAAATCACCAATGACAAATATGCCATTACCTCATAAGAATTTGATTCCCAATTACACGCTTCTTTCTGCTATTATGGAGTGGAAATGTAATGAAAACTGA 2370 0.4076 MERVRGIGDELKKSPSLHCSSSAVAVAIKGNNKSKLMVQWALDTFVPEGRIVFKLIHVHSAASFKKEMEWQTSAMLLPYRKMCEQRKVHVDIVVIQSEDVETAIAEEVAKSTITNLVIGASSHAIFTSKLKGLSAKISSRTPRFCTVYAVSKGKLFSSRPSDIEIDESLIDDSSETSCSTSTNSSLNSASTSQIDYGSVGSYAPINSSSLAAQRYQALSTINQTRHSSKPGLIEHNHSRSHSLDLGIEPTAVYSSTRNSDIDYALSRASSRKSNLSDGEFWNYYQNPTMDVSLATVLPDKQENFSLELEKLRIELKHAQGMHMVAQRQNIYASQMLNNLSKKRMEESMKLKEISAKEDMAQKLVIKEREKCEAAEREAAYLKRSSEEEAIEKSEAEKKAVEACRRNERLEDALSGSMLQYKKFAWHEIVSATSSFSEELIIGKGACGTVYKCHLYHTLVAVKILHSNENHIVKQLQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGSLEDNLLQSKSNISIPWFKRFQIAWEVASVLAFLHSSNPRPIIHRDLKPANILLDRNLVSKVGDIGLSTLLHSDTLSTMFKDTEPVGTLSYIDPEYQRTGEISPKSDVYAFGMVILQLLTAKPARALTHLVETAIDKGNLAEMLDPKAGDWPLKETLDLAQLGLKCAELRRRDRPDLKDRVLPILERLKVVADTAQHSGAIITLKSRPPNHFICPILQDVMDNPCVAADGYTYDHKAIVTWLQTNDKSPMTNMPLPHKNLIPNYTLLSAIMEWKCNEN 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1389 789 PANTHER OS02G0152300 PROTEIN 24 783 - -
Mibi01g1389 789 Gene3D HUPs 21 152 IPR014729 -
Mibi01g1389 789 Gene3D Phosphorylase Kinase; domain 1 406 507 - -
Mibi01g1389 789 CDD STK_N 24 153 - -
Mibi01g1389 789 Coils Coil 392 412 - -
Mibi01g1389 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 553 565 IPR008271 GO:0004672|GO:0006468
Mibi01g1389 789 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 24 134 - -
Mibi01g1389 789 ProSiteProfiles U-box domain profile. 718 789 IPR003613 GO:0004842|GO:0016567
Mibi01g1389 789 Coils Coil 308 328 - -
Mibi01g1389 789 Pfam U-box domain 720 787 IPR003613 GO:0004842|GO:0016567
Mibi01g1389 789 Gene3D Transferase(Phosphotransferase) domain 1 508 712 - -
Mibi01g1389 789 Pfam Protein kinase domain 437 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1389 789 SUPERFAMILY Protein kinase-like (PK-like) 417 690 IPR011009 -
Mibi01g1389 789 SMART serkin_6 435 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1389 789 ProSiteProfiles Protein kinase domain profile. 435 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1389 789 CDD RING-Ubox_WDSUB1_like 723 763 - -
Mibi01g1389 789 Coils Coil 336 356 - -
Mibi01g1389 789 SMART Ubox_2 722 784 IPR003613 GO:0004842|GO:0016567
Mibi01g1389 789 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 718 789 IPR013083 -
Mibi01g1389 789 SUPERFAMILY RING/U-box 718 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1389 Mibi-ChrMibi01 18265856 18272242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1389 21 785 U-box Gene Family AT4G25160 47.179 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mibi01g1389 Pkinase 1.8e-39 CL0016