Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1387 ATGAGCCACATTGTTGTATTTCTTCTTGGAGTATCTTTCGCTGCATTGATTTCAATTCTTGTTTTCTACATCTTCTTTTACCGCAAAAGAAGAGCAGCCCATGAGATCAAAGACATTGAAAGCCCAGAATTCAAACATGAAGATACAGTGCAGAAAGAGGACTTGGTGATCTTCCAAGGAGGTGAGAACCTCACAATATGTGACATTCTTGATGCTCCAGGGGAAGTAATTGGAAAATCCAATTATAGCACACTTTATAAGGCTTTGTTGCAGAGATGTAATGCAGTGAGGCTTCTGAGATTTTTGAGGCCAGTATGCACTACAAGGGACGAAGAATTGTTTGATGTGATTGGAATGATTGGAGGGATAAGGCATTCCAATTTGGTTCCTCTTGTTGGATTTTACTCTGGGCCAAGGGGGGAGAAGCTTCTTGTTCATCCATTTTATGGTCATGGGAATCTCACTCAGTTCATAAGAGATGGAAATGGCGAGTCTTACCACTGGGCTACGGTATACCGACTAACCTTTGGTATAGCCAAAGGACTAGAGCATCTTCACACTGGACTTGAGAAGCCTATGATCCACGGTAACCTCAAGTCGAAAAACATCCTTTTAGATCGCAATTACCAGCCATACATCTCGGATTCCGGCCTGCACCTCCTCTTGAATTCCACTGCTGGCCAAGAAATGCTTGAAGCCTCAGCCTCTCAGGGTTACAAGGCACCTGAACTGATCAAAATGAAGGATGTTAGTGAAGAGACCGATATATTTAGCCTCGGCGTGATCATGCTCGAGTTGCTTTCTAGAAAGGAGCCTATCAATGAGCATCCAACCCCTGATGAGGATTTCTATTTACCGAATTTCATGCGAAATGCTGTGCTTGGACATAGAATATCTGACTTGTACCATCCAGACATTCTTCTTTGCAAAAGCAGAGACAATGGTGGCCCGGTTAGCGAAGAATGCATCCTCAAGTATTTTCAACTTGCTATGTCTTGTTGTTCTCCTTCTCCTTCATTGAGACCAAACATAAAGCAAGTCCTTTGGAAGCTTGAAGAGATCATCAGGTAA 1071 0.4295 MSHIVVFLLGVSFAALISILVFYIFFYRKRRAAHEIKDIESPEFKHEDTVQKEDLVIFQGGENLTICDILDAPGEVIGKSNYSTLYKALLQRCNAVRLLRFLRPVCTTRDEELFDVIGMIGGIRHSNLVPLVGFYSGPRGEKLLVHPFYGHGNLTQFIRDGNGESYHWATVYRLTFGIAKGLEHLHTGLEKPMIHGNLKSKNILLDRNYQPYISDSGLHLLLNSTAGQEMLEASASQGYKAPELIKMKDVSEETDIFSLGVIMLELLSRKEPINEHPTPDEDFYLPNFMRNAVLGHRISDLYHPDILLCKSRDNGGPVSEECILKYFQLAMSCCSPSPSLRPNIKQVLWKLEEIIR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1387 356 Gene3D Transferase(Phosphotransferase) domain 1 150 356 - -
Mibi01g1387 356 Gene3D Phosphorylase Kinase; domain 1 72 148 - -
Mibi01g1387 356 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 29 354 - -
Mibi01g1387 356 Pfam Protein tyrosine and serine/threonine kinase 75 349 IPR001245 GO:0004672|GO:0006468
Mibi01g1387 356 ProSiteProfiles Protein kinase domain profile. 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1387 356 SUPERFAMILY Protein kinase-like (PK-like) 74 353 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1387 Mibi-ChrMibi01 18228674 18230642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1387 2 354 Carbohydrate Esterase AT5G61570 55.738 1.78e-135 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi01g1387 PK_Tyr_Ser-Thr 2.6e-27 CL0016