Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1372 ATGGACTCGAATGATGATAATAATAACAATGAAGCTGGGAAATCCTCACATTTCGACCCAGCTTTGAAATCATCGTCTATAAGAAGCATCACCTCCAGTCATTCCAGAGGATCCGATAGGATTTCAGTTCGAGAAGTCACTTTCAGCAATTCAGGATCAACAAGGCCTGTTCGTCATGGCTCAAAAGGTGCTGATTCCGACGGATTCAACATCTCACAGAAGGAAATCAACGACGAGGATGCAAGATTGGTATATATAAACGATCCTGAAAAAACAAACGAGACCTCTGAATTCGCAGGGAATACCATCAGTACTGGGAAATACAATATCATCACATTTCTTCCCAAGAATTTGTACGAACAATTTCATAGAATTGCTTATATTTATTTCCTGGTGCTGGCCATTATCAATCAGATTCCTCAGCTTGCTGTATTTGGTAGAGCAGTTTCTATTTTGCCTCTGGCATTTGTTCTGTTCATTACAGCTGTGAAGGATGCGTTTGAGGATTTTAGGAGGCATCGATCAGATAGCGTGGAGAACAACAGATTGGCGGCTGTTCTAGTTGGTGATAAGTTTGAACAGAAGAAATGGAAGGATATTAGAGTTGGTGAAGTTGTTAAGATTCATGCAAGTGAAACCATCCCTTGTGATATTGTGTTGTTGTCAACCAGTGATCCAACTGGGGTTGCGTATGTGCAGACTATAAATTTGGATGGGGAATCAAATTTGAAGAGTAGATATGCTAAACAAGAGACCCTTTCAAAGCAACCTGGAACTGGCACAATTAATGGTTTAATTAAGTGTGAGAAACCCAATAGGAACATATATGGGTTTCAGGGTAATATGGAAGTTGATCAAAAGCGTTTGTCACTTGGATCATCAAATATTGTACTTCGAGGCTGTGAGCTCAAGAATACTCAATGGGCTCTTGGTGTTGCTGTGTATTGTGGCAGTGAGACCAAAGCTATGCTCAACAATTCAGGAGCTCCATCTAAGAGAAGCAGATTGGAGACTCTGATGAACTCTGAGATAATCATGCTCTCTTACTTTCTTTTCGCTTTGTGTACGGTCACCTCAGTTTGTGCAGCTGTTTGGTTAGCGCGAAACAAGGATAAGTTGGATACTTTGCCTTATTATCGGAAGCTGATCTTTTATGAGAGAAAAGCTGATGGGGAATTCGAGACTTATAGGTATTATGGAATGGGATTGGAATTTATATTCACATTCTTGACGTCCATTATAGTGTTCCAGGTCATGATCCCCATAGCGTTGTACGTTTCTGTGGAGGTTGCCCGCGTTGGTCAGGCCTACTTCATGGTCCGAGACCATAGAATGTACGATGAGGCATCAGATTCCAGGTTTCAGTGCAGGGCTTTAAACATCAATGAAGATTTGGGGCAAATCAAGTATGTTTTCTCAGACAAAACTGGCACACTTACTGAGAACAAGATGGAGTTCCAATGTGCGAGCATCTGGGGTGAGGATTACAGTATAATAAATGAAATCCAGGAGAATGAGCAAGTTGAATACCCCGTCGAAGTGGATGGAGTAGTGTTGAGGCCCAAGATGAAGGTGAAAGTAAATCCGAAACTCTTGCAGTTATCAAGAAGTAGGCTTGAAAACAACAATGAAAAACCAATTCATGACTTCTTCCTAGCACTGGCAGCATGCAATACCATCGTTCCTCTTCATGTTGACACATCTGATCCTAAAGTTAAGTTGATAGATTATCAAGGGGAGTCACCAGATGAACAAGCACTGGTCTATGCGGCTGCCACCTATGGTTTTACTCTCATAGAACGGACCTCAGGCCACATAATTATTGATATTCAGGGGGAGAGACAAAAATTCAATGTCTTGGGCTTGCACGAATTTGATAGTGACAGGAAGAGAATGTCAGTCATATTGGGGTATCCTGACAATTCTGTGAGACTTTTTGTCAAGGGTGCTGATACATCCATGTTAAGTGTGATAGATAAGTCATCAAACATGGACATAATACATGCAACTGAAAGCCATCTCCACTCTTACTCTTCTCTGGGGTTGAGGACTCTTGTCATTGGAATGAGGGAGCTGAATACTTCAGAATTTGAGCAATGGCAGCAGTCCTTTGAGACAGCAAACAGTGCTTTGATGGGTCGGGCTGCTTTACTTCGCAAGGTTGCTAGCAATATTGAAAAGAACGTCTGCATATTGGGTGCATCTGCTATTGAAGATAAATTGCAGAAAGGGGTGCCGGAATCCATTGAGTCTCTGAGGACTGCAGGTATTCAGGTATGGGTGTTGACTGGGGACAAACAAGAAACAGCCATATCGATTGGCTATTCCTCAAAGCTCTTAACAGGTGACATGACTCAGATTATAATTAATAGCAACAACAAAGAGTCCTGCAGAAGGAAATTGCAAGATGCTTTAGTCATGTCCCAAAAACTCATGGCCTCTTCTGCTGTTGCCAATGATACTGCAACTTCTTTGACTCCTAAAATTCCACTAGCCTTGATCATTGATGGTACCAGCCTTGTACATGTTCTTGATAATGAGCTCGAAGAACAGCTCTTTCAACTAGCAACCAGATGTTCGGTGGTTCTCTGTTGTCGAGTGGCTCCATTGCAAAAAGCCGGAATCGTTGCCCTTGTGAAAAACAGGACGTCTGACTTGACACTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTTGGCATTAGTGGACAGGAAGGTCGGCAAGCTGTAATGGCGTCTGATTTTGCAATGGGGCAGTTTAGGTTTTTGGTTCCCCTCTTGTTGGTCCATGGACACTGGAATTACCAACGTATGGGTTATATGATACTATACAATTTTTACAGAAACGCTGTCCTTATTATGCTCTTCTTTTGGTATGTGCTCTCCACCGCCTTCAGTTTGACGATGGCTGTAAATGAATGGAACAGCGCTTTATACTCTATCATTTACACTGGAGTTCCAACAATTGCCGTTGGTATTCTTGACAAAGACCTTAGTAAAAGGACTCTTTTAAAACATCCTCAGCTTTATGGGGCCGGACAGAGACATGAGGCATACAACAAACACTTATTTTGGATTACAATGGCTGATACATTGTGGCAAAGCCTTGTTATCTTCTTTGGTGCTTTCTTTGCATACCAGAAAAGCACTATTGATTTATCGAGCATTGGAGATCTTTGGATTCTTGCAGTGGTTATTGTAGTTAATATACACATAGCCATGGATGTTATCAGGTGGAATTGGATTATTCATGCTTCCATTTGGGGGTCTATACTTGCAACTTTCATCTGCGTCCTGATCATTGATGCTATCCCCTCATTACCTGGTTACTGGGCCATCTTTCATACCTTAGGAACTGGACCCTTTTGGCTATGTCTGCTTGGTATCATCATCACAGCAATGCTCCCTCGTTTCATGGTGAAGTTTCTTTATCAATATTACTCCCCTGATGATATCCAGATTTCCAGAGAAGCCGAAAAGGTTGAAGCTTCAAGGGTGGTTGGTGGTGGAGATGTAGAAATGCATCCCATTTCAGTTGGTCCTTCAAGAAGATGA 3579 0.4202 MDSNDDNNNNEAGKSSHFDPALKSSSIRSITSSHSRGSDRISVREVTFSNSGSTRPVRHGSKGADSDGFNISQKEINDEDARLVYINDPEKTNETSEFAGNTISTGKYNIITFLPKNLYEQFHRIAYIYFLVLAIINQIPQLAVFGRAVSILPLAFVLFITAVKDAFEDFRRHRSDSVENNRLAAVLVGDKFEQKKWKDIRVGEVVKIHASETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKSRYAKQETLSKQPGTGTINGLIKCEKPNRNIYGFQGNMEVDQKRLSLGSSNIVLRGCELKNTQWALGVAVYCGSETKAMLNNSGAPSKRSRLETLMNSEIIMLSYFLFALCTVTSVCAAVWLARNKDKLDTLPYYRKLIFYERKADGEFETYRYYGMGLEFIFTFLTSIIVFQVMIPIALYVSVEVARVGQAYFMVRDHRMYDEASDSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGEDYSIINEIQENEQVEYPVEVDGVVLRPKMKVKVNPKLLQLSRSRLENNNEKPIHDFFLALAACNTIVPLHVDTSDPKVKLIDYQGESPDEQALVYAAATYGFTLIERTSGHIIIDIQGERQKFNVLGLHEFDSDRKRMSVILGYPDNSVRLFVKGADTSMLSVIDKSSNMDIIHATESHLHSYSSLGLRTLVIGMRELNTSEFEQWQQSFETANSALMGRAALLRKVASNIEKNVCILGASAIEDKLQKGVPESIESLRTAGIQVWVLTGDKQETAISIGYSSKLLTGDMTQIIINSNNKESCRRKLQDALVMSQKLMASSAVANDTATSLTPKIPLALIIDGTSLVHVLDNELEEQLFQLATRCSVVLCCRVAPLQKAGIVALVKNRTSDLTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVLIMLFFWYVLSTAFSLTMAVNEWNSALYSIIYTGVPTIAVGILDKDLSKRTLLKHPQLYGAGQRHEAYNKHLFWITMADTLWQSLVIFFGAFFAYQKSTIDLSSIGDLWILAVVIVVNIHIAMDVIRWNWIIHASIWGSILATFICVLIIDAIPSLPGYWAIFHTLGTGPFWLCLLGIIITAMLPRFMVKFLYQYYSPDDIQISREAEKVEASRVVGGGDVEMHPISVGPSRR 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1372 1192 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 478 744 IPR023299 GO:0000166
Mibi01g1372 1192 Pfam Cation transport ATPase (P-type) 580 656 - -
Mibi01g1372 1192 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 403 494 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi01g1372 1192 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 860 975 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi01g1372 1192 FunFam Phospholipid-transporting ATPase 576 709 - -
Mibi01g1372 1192 FunFam Phospholipid-transporting ATPase 156 325 - -
Mibi01g1372 1192 Gene3D - 728 930 IPR023214 -
Mibi01g1372 1192 Gene3D - 574 710 IPR023299 GO:0000166
Mibi01g1372 1192 SFLD Haloacid Dehalogenase 456 941 - -
Mibi01g1372 1192 SUPERFAMILY Calcium ATPase, transduction domain A 181 322 IPR008250 -
Mibi01g1372 1192 ProSitePatterns E1-E2 ATPases phosphorylation site. 474 480 IPR018303 -
Mibi01g1372 1192 PRINTS P-type cation-transporting ATPase superfamily signature 890 909 - -
Mibi01g1372 1192 PRINTS P-type cation-transporting ATPase superfamily signature 773 783 - -
Mibi01g1372 1192 PRINTS P-type cation-transporting ATPase superfamily signature 472 486 - -
Mibi01g1372 1192 FunFam Phospholipid-transporting ATPase 728 930 - -
Mibi01g1372 1192 Pfam E1-E2 ATPase 184 431 - -
Mibi01g1372 1192 MobiDBLite consensus disorder prediction 1 57 - -
Mibi01g1372 1192 Pfam Phospholipid-translocating ATPase N-terminal 84 150 IPR032631 -
Mibi01g1372 1192 Pfam Phospholipid-translocating P-type ATPase C-terminal 918 1157 IPR032630 -
Mibi01g1372 1192 SFLD p-type atpase 456 941 IPR044492 -
Mibi01g1372 1192 Gene3D - 161 325 - -
Mibi01g1372 1192 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 98 1165 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Mibi01g1372 1192 MobiDBLite consensus disorder prediction 1 71 - -
Mibi01g1372 1192 SUPERFAMILY Calcium ATPase, transmembrane domain M 97 1157 IPR023298 -
Mibi01g1372 1192 SUPERFAMILY HAD-like 467 945 IPR036412 -
Mibi01g1372 1192 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 74 1170 - -
Mibi01g1372 1192 CDD P-type_ATPase_APLT_Dnf-like 100 1050 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1372 Mibi-ChrMibi01 18087497 18092372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1372 14 1191 Primary Pumps ATPases AT5G04930 66.893 0.0 1656