Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1371 ATGAAGAGGAATTCCAGTGCTTCTTCTTCATCTTGTTCTTCTCCATCGCCATCTTCTTCTTCTTCTTCCTCTTCTTCTCTCGAGTTTCAGAATCCTGATCAGTCGGAAGCACGAGGCAGAGCAAGCAATAAACGAGCCAGAACGAGTGGTAACGGTAATGGAAACGGCAATGGTGATGGTAATAATGAGGATAATAAGTTAAAGAAGAAGAAGAAGGTGAGAGCTGTAAGCTCGAGTTCTTCCGCCATTAATGGCGGACGAAGAAGTTCCGTTTACAGAGGAGTTACCAGGCATCGATGGACTGGGAGGTTTGAAGCTCATCTCTGGGATAAGAGTTGCTGGAACAGTGTTCAGAACAAGAAGGGACGACAAGGGGCATATGATAATGAAGAAGCTGCTGCTAGAACCTACGATCTTGCTGCTCTTAAATACTGGGGAAGAGATTCAACATTGAATTTCCCGATAGGAACATATGTCAAGGAGCTCGAGGAAATGGAGAAGGTTACAAAAGAAGAGTACTTAGCTTCATTGCGCCGACAAAGCAGTGGGTTTTCTAGAGGGGTTTCTAAATATCGAGGGGTAGCCCGGCATCACCATAATGGTCGATGGGAAGCCCGGATTGGAAGAGTGCTAGGCAACAAATATCTCTACTTGGGCACATATAGTACCCAAGAAGAAGCAGCAACAGCATACGACCTGGCAGCTATACAATACAGAGGCGCAAATGCAGTCACCAATTTCGACATTAGCAGATACATCGACAAGATCAACCTCATCAACCATAACAACAATAGCGAATCACAAACCCTAATTACAACGCCATCACAAGTAGAAGATGAAGATGAAGAAGAAGATGCACCTCCCAATTCATCATCCTCATCCTCCTCTGAATCAGAAATTCTGCAGAGTCAGAAGCAATCGCCACAACAGCAATTACAAGACCTAGAAATCGAACCTGAAAACCCTAAAATTCAACCTGATCAAATATCTCCACCGAACGAAGAATCCTCTCCGATTGCTCCAGTGGACCCCACTGATGAACAAGAGCTTCCATGGATTTTCATGGACGACGACAGTTTTTCTCAGTTTCAAGTTCCAGATCTGCCTGACGACGACTTCTTAATAAGCGTGTTCGGCGATGGCGTGCGGAGATTCGACGACGACGACATTGGATTTCTTTTTCGGTCAGATCCAGAGGTGGCCGATTTCAATCTGGACGCGATTTTGAGCAGTCCGAGCTATGGAGATCTGGCGATGGCGGATTCAAGGAGGGTGGTGGTGGGTGATGAAGATGATTGTGGGAAAGAGAAGTTGAACTGTTGTGCGAATTCTGCATCTTGTTCACCAAACTCTTCGATTTCTTATAAGGAGTATAGTTGA 1380 0.4529 MKRNSSASSSSCSSPSPSSSSSSSSSLEFQNPDQSEARGRASNKRARTSGNGNGNGNGDGNNEDNKLKKKKKVRAVSSSSSAINGGRRSSVYRGVTRHRWTGRFEAHLWDKSCWNSVQNKKGRQGAYDNEEAAARTYDLAALKYWGRDSTLNFPIGTYVKELEEMEKVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTYSTQEEAATAYDLAAIQYRGANAVTNFDISRYIDKINLINHNNNSESQTLITTPSQVEDEDEEEDAPPNSSSSSSSESEILQSQKQSPQQQLQDLEIEPENPKIQPDQISPPNEESSPIAPVDPTDEQELPWIFMDDDSFSQFQVPDLPDDDFLISVFGDGVRRFDDDDIGFLFRSDPEVADFNLDAILSSPSYGDLAMADSRRVVVGDEDDCGKEKLNCCANSASCSPNSSISYKEYS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1371 459 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Mibi01g1371 459 PRINTS Ethylene responsive element binding protein signature 230 250 IPR001471 GO:0003700|GO:0006355
Mibi01g1371 459 ProSiteProfiles AP2/ERF domain profile. 190 248 IPR001471 GO:0003700|GO:0006355
Mibi01g1371 459 SUPERFAMILY DNA-binding domain 189 250 IPR016177 GO:0003677
Mibi01g1371 459 MobiDBLite consensus disorder prediction 1 87 - -
Mibi01g1371 459 MobiDBLite consensus disorder prediction 1 37 - -
Mibi01g1371 459 MobiDBLite consensus disorder prediction 266 345 - -
Mibi01g1371 459 SUPERFAMILY DNA-binding domain 90 155 IPR016177 GO:0003677
Mibi01g1371 459 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 25 309 - -
Mibi01g1371 459 CDD AP2 189 250 IPR001471 GO:0003700|GO:0006355
Mibi01g1371 459 FunFam AP2-like ethylene-responsive transcription factor 189 250 - -
Mibi01g1371 459 SMART rav1_2 190 254 IPR001471 GO:0003700|GO:0006355
Mibi01g1371 459 SMART rav1_2 91 160 IPR001471 GO:0003700|GO:0006355
Mibi01g1371 459 ProSiteProfiles AP2/ERF domain profile. 91 154 IPR001471 GO:0003700|GO:0006355
Mibi01g1371 459 Pfam AP2 domain 90 146 IPR001471 GO:0003700|GO:0006355
Mibi01g1371 459 Pfam AP2 domain 189 240 IPR001471 GO:0003700|GO:0006355
Mibi01g1371 459 FunFam AP2-like ethylene-responsive transcription factor 90 156 - -
Mibi01g1371 459 MobiDBLite consensus disorder prediction 288 316 - -
Mibi01g1371 459 MobiDBLite consensus disorder prediction 44 61 - -
Mibi01g1371 459 Gene3D AP2/ERF domain 189 250 IPR036955 GO:0003700|GO:0006355
Mibi01g1371 459 Gene3D AP2/ERF domain 91 156 IPR036955 GO:0003700|GO:0006355
Mibi01g1371 459 CDD AP2 90 155 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1371 Mibi-ChrMibi01 18055151 18062701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1371 184 266 AP2-EREBP Transcription Factor Family AT5G57390 38.462 9.35e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi01g1371 AP2 1.7e-08 CL0081