Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1362 ATGTACCTAACAGTTTTTACTCATCTTTTGCTTGGGCAGATCTTGATTTTAGGAATGGCTTCTTCAAGAACTGATATGCATGAAACACCTTTGCCTCCTCCACCTCCCATCCGTCCACATGTAAATCCAGAGAAAGCTCTGTTGCCCGTGAAGAAAACATCACATGGAAAACTCATGCCTATGACCAGGCGTGGTATTGGAACCAAGGGCCAAAAGATCCAACTTCAGACTAACCATTTTAAAGCCACCCTGGGAAACAAAGATGGCTTCTTCTATCACTATACCGTTGCTCTCTTTTATGAAGATGGAAAACCTGTCGAAGCGAAGGGTATTGGGAGAAGGGTCATAGACAACGTCTATGAGACCTATGCTTCTGAGCTGCAAAGCAATATCTTTGCATACGATGGAGAGAAAACTTTATTCACTATTAGTTCACTCCCACGTAACAAACTTGAATTCACCGTTGTGCTACATGAAGTTTCATCAAACAAGGTTGGAAGGAATGGGAGCCCTGAAAACTCAGAGGGTGTTGATAAGAAGAGAATGAGGCGCCCATATCAATCCAAGACATACAGGGTGGAGATCAGTTTTGCTAAAAAAATCCCCATGCAAGAAATTGTAGATGCATTGGGAGGGCTAAAATCTGATCATCACCAAGAAGCATTAAGGGTTCTGGATATCATATTAAGACAGCATGCAGCAAAACAGGGCTGTCTACTTGTGCGCCAATCATTCTTCCATGATAGAGTGGAAAATTACATAGACATTGGAGGTGGTGTTCAAGGTTGTCGTGGCTTTCATTCAAGTTTCCGAGCCACTCAAGGGGGTTTGTCCCTCAACGTTGATGTGTCAACAACATTGCTACTAAAGCCTGGTCCAGTGTTAGAATTCCTCTGCGCCAATCAAAATATTAATCATCCCCGTTGCATTAATTGGATCAAGGCAAAAAGGATGTTAAAAAATTTGAGAATCAAGGTTAACAATAGGGAGTACAAAATCACTGGATTGAGCGATATGCCCTGCAAGGATCAAATATTTACCTGGAAGCAAGGAATAGACAAAAATGGTGAAGTGAATTCAATTGATATAACAGTTGCTGACTATTTTGAACGGCATAAAGGCATCAGATTACGTGATTCAGCTAATCTGCCTTGCATCAATGTTGGCAAACCAAAGAAACCTTCTTATTTTCCAATTGAGTTGTGTACTTTGGTTCCCCTGCAACGCTACACCAAGGCCCTTACAAGTTTGCAAAGAGCTTCAATTGTAGAAGTTTCAAGGCAGAAGCCCCGTGAACGAATGCATTCTCTTTCAAATTCACTAAGAAACAGTAGATATAATGATGAACCTATGCTTCATTCTTCTGGAATTACCATTGAGTCTGAGTTCACAAAAGTTGAAGGTCGTGTTCTCCCAGCTCCAAAGCTTATTGTTGGGAATGGGGAGGACTTCTTTCCCAGAAATGGAAGGTGGAATTTCAACAATAAGCAACTTTTTCAACCAATGGTGATTGAACGTTGGGCTATAGTCAGCTTCTCACCTCGTTGTAATATTCACCACCTTATTGAAGGCCTGCAAAAGTGTGCACGCGGAAAGGGGATGGTCTTGACATATCCATTTAGGGTGTTCAAGGAGGACGAACGTGATAGTCGTAAGCCGGCCAATATCAGGGTTGAGGTATTGTATGCGCATGTGAAGAAGTTCTTGCCTGGACCACCCCAGCTTCTATTGTGCATTTTGCCAGAGAGGAAGAATTCTGATCTTTATGGTCCTTGGAAAAGAATAAATCTTGCCGAGGATGAGAAAGAGGGAGGGGTCGTCACACAATGCATTTCCCCAACAAAAATGAATGATCAGTACTTTACCAATGTGTTGTTGAAGATTAATGCCAAGCTTGGTGGAATGAATTCCTTTTTGGAAAATGAATATTCACTTTCTATACCTATGGTTTCAAAGGTGCCTACTTTAATTCTTGGCGTTGATGTCTCACATGGATCTCCAGGTCGATCAGATGTACCATCTATCGCTGCGGTTGTTAGTTCAAGGTGTTGGCCTCAAATCTCACGTTACAGAGCATCAGTTCGTGCTCAATCACCAAAGGTTGAGATGATTGCTAATTTCTTCAATCCCATTTCTGATACTAAGGATGATGGTATTTTCAGAGAGGCTCTTGATGACTTCATGGCAAGTTCAAATAACACCAGGCCTGAACATATCATCATATTCAGGGATGGAGTTAGTGAATCACAATTCAACCAAGTGTTGAACATTGAGCTCAATCAAATCATCCAGGCTTGCAAGCACTTTCAAGAAAGTTGGGATCCGAAATTCACTGTGATTATTGCCCAGAAAATTCATCATACTAAGTTCTTCCAAGTCAATGCTCAAGAAAATGTTCCACCAGGAACTGTCATTGATAATAAAATCTGTCACCCGAAGAACAATGATTTTTACATGTGTGCTCAAGCTGGGATGATTGGAACAAGTCGGCCTACTCATTACCATGTACTACATGATGAGATTGGTTTCTCTGCTGATGGTTTGCAAGAACTTGTGCATTCTCTTTGTTATGTTTATCAGAGGAGCACAACAGCTATATCAGTTGTTGCTCCAATCTGTTATGCACACTTGGCAGCAGCACAAGTGTCACAGTTTATAAAGTTTGATGAATTATCAGAGACATCATCAAGCCATGGTGGAGTTTCTTCTGTTGGTGCACCTCAAGTGCAAGACTTACCTCGTCTTCATGAACGGGTCCGCAACTCCATGTTCTTCTGTTAA 2781 0.4153 MYLTVFTHLLLGQILILGMASSRTDMHETPLPPPPPIRPHVNPEKALLPVKKTSHGKLMPMTRRGIGTKGQKIQLQTNHFKATLGNKDGFFYHYTVALFYEDGKPVEAKGIGRRVIDNVYETYASELQSNIFAYDGEKTLFTISSLPRNKLEFTVVLHEVSSNKVGRNGSPENSEGVDKKRMRRPYQSKTYRVEISFAKKIPMQEIVDALGGLKSDHHQEALRVLDIILRQHAAKQGCLLVRQSFFHDRVENYIDIGGGVQGCRGFHSSFRATQGGLSLNVDVSTTLLLKPGPVLEFLCANQNINHPRCINWIKAKRMLKNLRIKVNNREYKITGLSDMPCKDQIFTWKQGIDKNGEVNSIDITVADYFERHKGIRLRDSANLPCINVGKPKKPSYFPIELCTLVPLQRYTKALTSLQRASIVEVSRQKPRERMHSLSNSLRNSRYNDEPMLHSSGITIESEFTKVEGRVLPAPKLIVGNGEDFFPRNGRWNFNNKQLFQPMVIERWAIVSFSPRCNIHHLIEGLQKCARGKGMVLTYPFRVFKEDERDSRKPANIRVEVLYAHVKKFLPGPPQLLLCILPERKNSDLYGPWKRINLAEDEKEGGVVTQCISPTKMNDQYFTNVLLKINAKLGGMNSFLENEYSLSIPMVSKVPTLILGVDVSHGSPGRSDVPSIAAVVSSRCWPQISRYRASVRAQSPKVEMIANFFNPISDTKDDGIFREALDDFMASSNNTRPEHIIIFRDGVSESQFNQVLNIELNQIIQACKHFQESWDPKFTVIIAQKIHHTKFFQVNAQENVPPGTVIDNKICHPKNNDFYMCAQAGMIGTSRPTHYHVLHDEIGFSADGLQELVHSLCYVYQRSTTAISVVAPICYAHLAAAQVSQFIKFDELSETSSSHGGVSSVGAPQVQDLPRLHERVRNSMFFC 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1362 926 SUPERFAMILY PAZ domain 286 447 IPR036085 GO:0005515
Mibi01g1362 926 CDD Piwi_ago-like 450 886 IPR045246 -
Mibi01g1362 926 SMART DUF1785_2 239 291 IPR014811 -
Mibi01g1362 926 FunFam Protein argonaute 3 647 926 - -
Mibi01g1362 926 Gene3D - 470 641 - -
Mibi01g1362 926 Pfam Argonaute linker 2 domain 432 476 IPR032472 -
Mibi01g1362 926 SUPERFAMILY Ribonuclease H-like 563 885 IPR012337 -
Mibi01g1362 926 Gene3D paz domain 285 410 - -
Mibi01g1362 926 CDD PAZ_argonaute_like 291 405 - -
Mibi01g1362 926 ProSiteProfiles Piwi domain profile. 575 887 IPR003165 GO:0003676
Mibi01g1362 926 Pfam Piwi domain 576 887 IPR003165 GO:0003676
Mibi01g1362 926 Pfam Argonaute linker 1 domain 241 287 IPR014811 -
Mibi01g1362 926 ProSiteProfiles PAZ domain profile. 329 406 IPR003100 GO:0005515
Mibi01g1362 926 SMART Piwi_a_2 575 887 IPR003165 GO:0003676
Mibi01g1362 926 Gene3D - 646 926 IPR036397 GO:0003676
Mibi01g1362 926 Pfam PAZ domain 295 422 IPR003100 GO:0005515
Mibi01g1362 926 Pfam N-terminal domain of argonaute 71 229 IPR032474 -
Mibi01g1362 926 Pfam Mid domain of argonaute 486 547 IPR032473 -
Mibi01g1362 926 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 54 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1362 Mibi-ChrMibi01 17965836 17972052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1362 63 926 Eukaryotic Initiation Factors Gene Family AT5G43810 34.884 6.06e-167 511