Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1360 ATGGGTCATCCAACCTGGAACAATTCATTATTGTTTTTGTTCTTTGAGTACTGCACTACTAAGGTACTGCTGAAAATCATCAGGCTGAAAGCTGTTCTCATCATGGACATAGATCTGAGGTTACCTTCTGGTGACCATGATAAGGATGAAGAGCGAAATACAATTGCTGACATATTGGAAGATGAGGAAAAATTTCATCCTGGAGACCTAGAAGGCCAGAATATGGTTGGTCCTAGTGTTGATGTACATGCTTTAGAAAATGGAGATTTGAATTCATCTACAGTGGATATGGCAATATTTAAGGAAGATACAAATCTTGAGCCCCTTTCTGGCATGGAATTTGAGTCTCATGGGGAAGCTTATTCATTCTATCAAGAATATGCAAGGTCAATGGGATTCAACACTGCGATACAAAATAGTCGTCGTTCAAAGACATCGAGAGAATTTATAGATGCAAAATTTGCTTGTTCCAGGTATGGAACGAAAAGAGAGCATGACAAATCATTCAATCGACCACGTGCCAGACAGAACAAGCAAGATGCTGAAAATTCAACTGGTCGAAGATCTTGTTCAAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGCCAGATGGAAAATGGGTAATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCTCAAGCTGTTAGTGAACAAACAAGAAAAATGTATGCTGCAATGGCTAGACAGTTTGCTGAATACAAAACTGTGGTTGGTCTTAAGAATGAGAAAAGTCCATTTGACAAAGGCCGGAATTTGGGTCTGGAGTCAGGGGATGCCAAGCTTCTACTTGATTTTATGGTGCAGATGCTTAGTATGAATTCAAACTTCTTTTATGCAGTAGATATTGGTGAGGATCAACGTTTGAAGAATCTTTTATGGATTGACGCTAAAAGTAGGCATGACTATGTGAACTTTTGTGATGTAGTTTCTTTTGACACCTTCTATGTTAGAAACAAATATAAGTTGCCTCTTGTGCTTTTTGTTGGAGTAAATCAGCACTATCAATTTATACTACTTGGGTGCGCTTTAATATCAGATGAAAGTGTCGCCACTTATTCCTGGCTAATGCGTACGTGGCTGAAAGCAGTTGGTGGCCAAGCTCCAAAAGTGATCATCATTGACCCTGACAAGACATTAAAATCAGTTGTTTTAGATGTTTTTCCCAATGCTCATCACTCCGTGTGCTTATGGCATGTATTAGGGAAGGTCTCTGAAAATCTGGCTCATGTAATTAAACGACACGAGAATTTTATGGCAAAATTTGAAAAGTGCATCTATAGGTCATGGACAAATGATGAGTTTGAGAAGAGGTGGTCGAAAATTGTTGATAGGTTTGAACTCCGAGAGGATGAATGCATGCAGTCATTGTATGAAGATCGCAAGCTATGGGTGCCAACATTCATGAGGAATATTTTCTTAGGTGGTTTGTCCACTGTCCAGCGGTCAGAAAGTGTGAATTCCTTCTTTGATAAATATGTTCATAAGAAGACCTCCGTGCAAGATTTTATCAAGCAGTACGAAACAATCTTGCAAGACAGGTATGAAGAGGAAGCAAAAGGTGATTCTGAGACATGGAATAAGGTGGCAACGTTAAAAACTCCTTCACCATTGGAGAAGAGTGTTGCTGGGAGTTACACACATGCAGTGTTCAAGAAGATTCAAGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAAGCTGAAAGACATGATGATTCAGGAATTAATTACAAGGTTCATGATATGGAAAAGAATCAAGACTTCATGGTGGTGTGGAATGAAATTAAGTCTGAAGTTTCTTGCATATGTCGGTTATTTGAATACAGAGGTTTTCTGTGCCGACATGCATTGATTGTTCTTCAATATTCTGGCCTTTCTGTAATCCCATCACAATATATCTTGAAACGGTGGACGAGAGATGCAAAAGGTGGACAAACAATGGGAGAAGAATATGATCATATGCTAGCTAGGGTACAACGTTACAATGATTTATGTCAGCGATCAATGAAGTTGAGTGAAGAGGGTTCTCTATCTCAAGACAGTTATAGTATTGCATTCCATGCGTTACGTGAAGCATACAAAAGTTGTGTGAGTGCTAACAATTCTAGCAAGAGTCCTATCGAAGTTGTAATATCGGCTAGTCATGGTCAGCTCTCTACTGAAGAAGATACCCAAAGTAGAAATATGGGCAAGACAAAGAAAAAGAAGAATCCTACAAAAAAGAAAAAGCTGAACTCTGAGTCTGAAGTCATGACTGTTGGGGCACAAGATGACATGCAGCAAATGGACAAATTCAATGCAAGGCCAGTAACTCTTGATGGTTACTATGGCTCTCAACAAAGTGTTCAGGGAATGTTGAACTTGATGGGACCAACACGCGATAATTATTATGGGAATCAACAGACAATGCAGGGGCTGGGACAATTAAGTTCCATACCAACGACCCACGATGGTTATTATGGTGCTCATCAAAGCATGCCTGGTCTGGCACAGCTTGATTTTTTCCGGGCACCGTCAAATTTCACTTATAGCATTCGGGATGATCAAAACGTAAGACCGACACAATTGCATGAGGACCCATCAAGACATGCATGA 2634 0.3971 MGHPTWNNSLLFLFFEYCTTKVLLKIIRLKAVLIMDIDLRLPSGDHDKDEERNTIADILEDEEKFHPGDLEGQNMVGPSVDVHALENGDLNSSTVDMAIFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREHDKSFNRPRARQNKQDAENSTGRRSCSKTDCKASMHVKRRPDGKWVIHSFVKEHNHELLPAQAVSEQTRKMYAAMARQFAEYKTVVGLKNEKSPFDKGRNLGLESGDAKLLLDFMVQMLSMNSNFFYAVDIGEDQRLKNLLWIDAKSRHDYVNFCDVVSFDTFYVRNKYKLPLVLFVGVNQHYQFILLGCALISDESVATYSWLMRTWLKAVGGQAPKVIIIDPDKTLKSVVLDVFPNAHHSVCLWHVLGKVSENLAHVIKRHENFMAKFEKCIYRSWTNDEFEKRWSKIVDRFELREDECMQSLYEDRKLWVPTFMRNIFLGGLSTVQRSESVNSFFDKYVHKKTSVQDFIKQYETILQDRYEEEAKGDSETWNKVATLKTPSPLEKSVAGSYTHAVFKKIQVEVIGAVACHPKAERHDDSGINYKVHDMEKNQDFMVVWNEIKSEVSCICRLFEYRGFLCRHALIVLQYSGLSVIPSQYILKRWTRDAKGGQTMGEEYDHMLARVQRYNDLCQRSMKLSEEGSLSQDSYSIAFHALREAYKSCVSANNSSKSPIEVVISASHGQLSTEEDTQSRNMGKTKKKKNPTKKKKLNSESEVMTVGAQDDMQQMDKFNARPVTLDGYYGSQQSVQGMLNLMGPTRDNYYGNQQTMQGLGQLSSIPTTHDGYYGAHQSMPGLAQLDFFRAPSNFTYSIRDDQNVRPTQLHEDPSRHA 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1360 877 ProSiteProfiles Zinc finger SWIM-type profile. 601 637 IPR007527 GO:0008270
Mibi01g1360 877 Pfam FAR1 DNA-binding domain 122 224 IPR004330 -
Mibi01g1360 877 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 102 710 IPR031052 GO:0006355
Mibi01g1360 877 SMART 26again6 612 639 IPR006564 GO:0008270
Mibi01g1360 877 Pfam MULE transposase domain 321 413 IPR018289 -
Mibi01g1360 877 Pfam SWIM zinc finger 609 635 IPR007527 GO:0008270
Mibi01g1360 877 MobiDBLite consensus disorder prediction 727 762 - -
Mibi01g1360 877 MobiDBLite consensus disorder prediction 163 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1360 Mibi-ChrMibi01 17925207 17928943 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mibi01g1360 FAR1 1.2e-27 CL0274