Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1356 ATGTCCTCCTCCCCCTCCCCATTCTTCTTATTCTTGTTCCTCTTTCTTCCACTATTACCCCTCCATGCCCAACCCCCTCCTCCACCACCATCTCCTTCCTCTCTGTGCAAGAACACATTGTACCCAAAACTATGCCATTCCATGCTCTCCCTCATCTCCTCCTCCTCAGATCCCTACAATGCAGGCAAGTTCTCCATCAAGCAAAGCCTCAAACAAGCCAACAAGCTCCTCAACATCTTCAACCACTTCCTCCTAAGCCGCCGCCATTCTCAGCCCTCCCCTGAGGTCAACGCCCTCGACGACTGTCGCGACCTCACCCTCCTCAACCTTGACTACTTGGAAGCCGTCTCCGCCGACCTCCAAGCCGCCTACTCCGCCGTGGATGTGAAGGATAAGGTGGAGAGCTACATGAGCGCCGTGGCCACCAACCACTACACATGTTATGACGGCCTTGTGGCTGCTAATAGTGACATAGGGAGGGCCATGGCGGTGGCTATGGGGAATGTGAGGGAAGTGTATAGTGTGTCTTTGGGGTTGGTGACTGAGGCTGTGAATCATAATGTGAAGAAGAAGTGGAAGAATGGTGGCAAGCATGGACTTCTTCCTTCTCACTCTTACACATTGGTCAGACAGCCTCTTCATAAGCTCATTCAGGTTCTTCATGAGAAGTACAGTTGCAAGGCATCATCATCATCAAACTGTAGAAGCCATTATGGGATTATTCAGAGAGAGAGTGAAAGCAAAGGGATTCTATTGAACAACTATGCAATTGTGAGCCATTATGGGACTGATAACTTCACCTCCATTGGAGAAGCTATTTCCGCTGTCCCCACTAACCTCAAACCAGAAGATGGATACTTCCTTATCTATGTCAGAGAGGGATATTATGAAGAATATGTGATTGTTCCTAAACACAAGAAAAATATCTTGCTCATTGGTGATGGCATCAACCAAACAATCATCACAGGCAATCACAGTGTCATTGATGGTTGGACAACCTTCAATTCTTCCACCTTTGCTGTATCTGGAGAAAGATTCATAGCAGTGGATATCACAATCAGGAACACAGCAGGTCCCGAGAAGCACCAGGCAGTGGCAGTGAGGAACAATGCTGATCTTTCGACCTTTTATCGATGCAGCTTTGAAGGATACCAAGACACACTCTATGCTCACTCCCTGAGGCAATTCTACAGAGAATGTGAGATTTATGGTACAGTGGACTTCATTTTTGGCAATGCAGCTGTTGTTTTTCAAGGCTGCAAGATCTATGCCAAGAAGCCACTTCCATCCCAAAAAAATGCCATCACAGCACAAGGCAGATCTGACCCGAATCAGAACACTGGAATCTCAATCCAGAATTGCACCATTCAAGCAGCACAGGATTTGGCTTTAGATTTGAACTCTACCACTAATTCTTCTGTTTTGACATACTTAGGAAGGCCGTGGAAGTTATATTCCAGAACTGTGTTCATGGAGTCTTATATTGGGGATGTGATTCAACCTTCTGGTTGGTTGGAGTGGAATGGGACAGTAGGGTTGGACACTTTGTTTTTTGGTGAGTTCAATAATTATGGACCTAGGGCTAGTACTAGCAACAGGGTTCACTGGCCTGGTTTTAATCTTCTGAATGCTACTCAGGCTATGAACTTTACTGTCCTCAATTTTACACTGGGAGATACTTGGCTTCCTGACACAGATATACCATACTCTGCAGGATTACTAGGAAATTAG 1731 0.4616 MSSSPSPFFLFLFLFLPLLPLHAQPPPPPPSPSSLCKNTLYPKLCHSMLSLISSSSDPYNAGKFSIKQSLKQANKLLNIFNHFLLSRRHSQPSPEVNALDDCRDLTLLNLDYLEAVSADLQAAYSAVDVKDKVESYMSAVATNHYTCYDGLVAANSDIGRAMAVAMGNVREVYSVSLGLVTEAVNHNVKKKWKNGGKHGLLPSHSYTLVRQPLHKLIQVLHEKYSCKASSSSNCRSHYGIIQRESESKGILLNNYAIVSHYGTDNFTSIGEAISAVPTNLKPEDGYFLIYVREGYYEEYVIVPKHKKNILLIGDGINQTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDITIRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECEIYGTVDFIFGNAAVVFQGCKIYAKKPLPSQKNAITAQGRSDPNQNTGISIQNCTIQAAQDLALDLNSTTNSSVLTYLGRPWKLYSRTVFMESYIGDVIQPSGWLEWNGTVGLDTLFFGEFNNYGPRASTSNRVHWPGFNLLNATQAMNFTVLNFTLGDTWLPDTDIPYSAGLLGN 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1356 576 Gene3D - 251 573 IPR012334 -
Mibi01g1356 576 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Mibi01g1356 576 Pfam Plant invertase/pectin methylesterase inhibitor 33 178 IPR006501 GO:0004857
Mibi01g1356 576 CDD PMEI-like_3 36 182 - -
Mibi01g1356 576 Pfam Pectinesterase 256 558 IPR000070 GO:0030599|GO:0042545
Mibi01g1356 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 182 IPR035513 -
Mibi01g1356 576 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 181 IPR006501 GO:0004857
Mibi01g1356 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 181 IPR035513 -
Mibi01g1356 576 PANTHER PECTINESTERASE 19 563 - -
Mibi01g1356 576 FunFam Pectinesterase 251 573 - -
Mibi01g1356 576 SMART PMEI_2 27 179 IPR006501 GO:0004857
Mibi01g1356 576 SUPERFAMILY Pectin lyase-like 253 572 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1356 Mibi-ChrMibi01 17886722 17890781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1356 36 574 Carbohydrate Esterase AT3G10720 56.960 0.0 636