Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1355 ATGTCTCCCTACGGCAAGCTCAACGAATCTGAGCAAGAAAAGCTCATAGCTCGCCGGAAAACCCGGAGGCGAATCGCCATTATGAGCTTGTCAGCTATTGTCCTAGTGGGTGTTGTTGTGGCAGCTGTCTTAGGAACAAGTCTTGCTCACAACAATGACAAGGACAATAACAACAACGGCAACAGCAGCAGCAATAATGTGGATGTTTCGGCTTCGGTAAAAGCCGTGTGTGATGTGACATTGTTCAAGGATGCTTGTTATGCAAGCCTTGGCCATGTTGTTCAACCAGGACAGTTGATTAAGCCTGAGGATTTGTTCAGGCTATCTATTCAAGTTGCATTGAATGAAGTTTCTAGTGCTGCTGGTAAGTATTTTTCTGGTGAAAAGGGAGGTTTTGGGGATTTGATTGGTAATGATAATAGGACCATGGAAGCTTTCGGTAATTGCAAGGAGCTTTTGGGTCTTGCTGTTGATCATCTGAATATCTCATTGTCTTATGGGCAGAATTCTTCTTCTGTTCTTGATCTTTTTGATGATCTTCAAACATGGTTGAGTGCTTCAGGAACATACCAACAAACATGCATAGATGGCTTAGAGGAAGCAAAAGGATCACTAAACAATATATCTAGAAGCTACCTGAAGAACTCCACTGAGTTTACCAGCAATAGTCTTGCCATTATCACTTGGATTCAGCAAGCAACAAGCACCCTAAACTTCAGACGGCGACGCTTGTTATTAGCCCGACCAGATCACAATGAAGAACCATCATGGCTTCATCATAAAGACAGAAAGTTGCTTGCATCATCAGACAAGGACTCGAAGCAGAAAGCAGACATTGTTGTGGCAAAAGATGGTTCTGGAAAGTACAGAACAATCTCTGAAGCACTCAAGCATGTCCCCGAGAAGAGCAAGAAGAGAACTGTGATACATGTGAATAAAGGAGTTTACTATGAGAATGTTAAAGTGGAGAAGAACAAGTGGAATGTCATGATGATTGGTGATGGAATGAACTCAACAATTGTGTCCGGTAGTCTCAACTTTGTTGATGGCACTCCCACTTTCTCAACAGCAACATTTGCTGTTTTTGGGAAGAACTTCATGGCGAGGGACATGGGATTTAAGAACACAGCTGGGCCGCAGAAGCACCAAGCGGTGGCGCTGATGACAAGTGCTGATCAGGCTGTGTTCTACAGATGCCTCATTGATGCATTTCAGGACACTCTCTATGCTCAGTCACTGCGCCAGTTCTATAGAGAATGCAACATCTATGGCACTGTTGATTTCATCTTTGGCAACTCTGCTGTTGTTATCCAAAACTCCAACATCTTCCCAAAGGTACCTATGTGGGGCCAGCAGAACACAATTACAGCACAAGGGAAGATAGACCCTAACATGAACACAGGGATTTCAATTCAGAATTGCAGCATCACACCATTTGGGAACTTGAATTCTGTGCAAACATATCTTGGAAGGCCATGGAAGAACTACTCAACGACTGTGTTCATGCAATCTTCAATGGGAAACTTAATTAATCCTAGTGGCTGGTTGCCATGGGTAGGAAACTCAGCACCAGACACCATTTTCTATGCTGAGTTTCAGAATTTTGGGCCTGGTGCTACAACAAAACGTAGGGTCGCATGGAAGGGATTAAGAACAATTTCTTCTAAACAAGCAAATAAATTCACTGTCAAGGCCTTTCTTCAAGGAGACCGATGGATTCCAGACACAAGCACCCCCTACAAGTCTTCTCTGTGA 1755 0.4353 MSPYGKLNESEQEKLIARRKTRRRIAIMSLSAIVLVGVVVAAVLGTSLAHNNDKDNNNNGNSSSNNVDVSASVKAVCDVTLFKDACYASLGHVVQPGQLIKPEDLFRLSIQVALNEVSSAAGKYFSGEKGGFGDLIGNDNRTMEAFGNCKELLGLAVDHLNISLSYGQNSSSVLDLFDDLQTWLSASGTYQQTCIDGLEEAKGSLNNISRSYLKNSTEFTSNSLAIITWIQQATSTLNFRRRRLLLARPDHNEEPSWLHHKDRKLLASSDKDSKQKADIVVAKDGSGKYRTISEALKHVPEKSKKRTVIHVNKGVYYENVKVEKNKWNVMMIGDGMNSTIVSGSLNFVDGTPTFSTATFAVFGKNFMARDMGFKNTAGPQKHQAVALMTSADQAVFYRCLIDAFQDTLYAQSLRQFYRECNIYGTVDFIFGNSAVVIQNSNIFPKVPMWGQQNTITAQGKIDPNMNTGISIQNCSITPFGNLNSVQTYLGRPWKNYSTTVFMQSSMGNLINPSGWLPWVGNSAPDTIFYAEFQNFGPGATTKRRVAWKGLRTISSKQANKFTVKAFLQGDRWIPDTSTPYKSSL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1355 584 FunFam Pectinesterase 272 584 - -
Mibi01g1355 584 Gene3D - 272 584 IPR012334 -
Mibi01g1355 584 TIGRFAM PME_inhib: pectinesterase inhibitor domain 70 230 IPR006501 GO:0004857
Mibi01g1355 584 Pfam Pectinesterase 278 570 IPR000070 GO:0030599|GO:0042545
Mibi01g1355 584 CDD PMEI-like_3 75 230 - -
Mibi01g1355 584 Pfam Plant invertase/pectin methylesterase inhibitor 72 226 IPR006501 GO:0004857
Mibi01g1355 584 SMART PMEI_2 68 226 IPR006501 GO:0004857
Mibi01g1355 584 ProSitePatterns Pectinesterase signature 2. 422 431 IPR033131 -
Mibi01g1355 584 PANTHER PECTINESTERASE 36 576 - -
Mibi01g1355 584 SUPERFAMILY Pectin lyase-like 276 580 IPR011050 -
Mibi01g1355 584 FunFam Pectinesterase 69 231 - -
Mibi01g1355 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 72 230 IPR035513 -
Mibi01g1355 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 231 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1355 Mibi-ChrMibi01 17883273 17885839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1355 2 584 Carbohydrate Esterase AT3G10710 56.048 0.0 657