Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1344 ATGAAGAATGTGTGCTTGTTTGTGGATTCTTGGGAAGTGCTCAGTTTGTTTCTGGTGCGGGGTTATGACTTGCATAGAGAGAAGGAGAAGAGAGTAGCAGAGAAGAAGAAGAGGTTCAAGAAGAACAGGAAGAAGAGAGGCCACGTCAGCGCCGGCCATGGCCGTATCGGAAAACACCGTAAGCATCCCGGAGGTAGAGGTAACGCCGGAGGAATGCACCATCACCGAATCCTATTCGATAAATACCATCCTGGTTACTTCGGCAAGGTCGGTATGCGATATTTTCACAAGCTTCGCAATCAATTCCATTGCCCCATTGTTAATATTGACAAGCTCTGGTCTCTTCTACCACAAGAAGTTAGGGATAAGGCTTCTAAGGATAATGCCCCTTTGATTGATGTCACTCAATTTGGTTACTTTAAGGTTTTGGGGAAAGGCGTTTTGCCTGAGGATAGGCCTCTTGTTGTTAAGGCTAGCTTGTTTCTAAGATTGCTGAGAAAAAGATTAAGGAGGCTGGAGGAGCTGTTGTCCTCACTGCTTAGCTTAAATGGGTTTTAA 558 0.4534 MKNVCLFVDSWEVLSLFLVRGYDLHREKEKRVAEKKKRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNQFHCPIVNIDKLWSLLPQEVRDKASKDNAPLIDVTQFGYFKVLGKGVLPEDRPLVVKASLFLRLLRKRLRRLEELLSSLLSLNGF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1344 185 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 62 160 IPR021131 -
Mibi01g1344 185 Coils Coil 162 182 - -
Mibi01g1344 185 SUPERFAMILY Ribosomal proteins L15p and L18e 40 161 IPR036227 -
Mibi01g1344 185 MobiDBLite consensus disorder prediction 31 68 - -
Mibi01g1344 185 PANTHER 60S RIBOSOMAL PROTEIN L27A 37 166 - -
Mibi01g1344 185 Gene3D - 92 174 - -
Mibi01g1344 185 MobiDBLite consensus disorder prediction 30 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1344 Mibi-ChrMibi01 17574847 17576768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1344 38 170 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 79.699 1.62e-78 229