Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1326 ATGGAAGGAGGGTTAGGCCAAAACTCTGATCCTCCATCAAGCTCTTTAGACAAGTCCAAGATTTTAGATGTTAAACCTCTGCGTTGCATGCTACCAATTTTCCCAATGTCATCTCAAGGTCCTTCCTCTGGTCAATATCCTTCTGGGTTTGCTCCTTTTTTCCCCTTTGGTGGACCTCAAGAATCTCATGCATGGACTGATCTTAACCAGCATGCTTCTGCCTCTGAAGTGACACTTGATGTTCCAATGCCTACTCCGATCCGTACATTTAGAAGCCCTATAGACTCTACTCAATCAGAACATGAAACATTACCTGGGAGTGGCTCAAGATCATCCAAAAGAAAGGCCAAGAAGAGCCAAGAATTACTAGTGGATTTAAGTTCTGTTGTTGGTATTAGCCCGGCCCAACAAGCTGATGGTGACAGGGAAGTGGTTAATTTTGTACTTATGGAGTTTGATGCGCTAAGAAGGAGAATTAGCCAACTTGCAGATGCTGGGGAGTTTGTTTCTGGAACAACTAAGCGTGGAGATTTGAAATCTGGCAATGTGTTGATGACCGCTGGCATTCGAACAAACATGAAGAAGAGAGTAGGTGCGGTTCCTGGGGTTGAGATAGGGGACATTTTCTTTTTCAGGATGGAACTATGTGTTGTGGGGCTACATGCTCAGTCCATGGGTGGGATTGACTCTTTGACCATCAAGGGTGGGCATGAGGAAGAACCTTTGGCTGTATGCATTGTTTCGTCATATGAATATGATGACAACGCGGATGATGATGATGTTTTAATTTATAGTGGACAGAGTGGGAACTTTGGCAAGAGAGAGAAGGCAGCGTCTGATCAGAAGCTTCAAAGGGGTAATCTTGCTTTGGAAAGGAGTTCACGACGGCATAATGAAGTGAGAGTCATCCGGGGCATGAAAGATGTTACTAATCCAAGTGCAAAAATATATGTCTATGATGGTCTGTACAAAATTCAAGAATCATGGATAGAAAAGGGGAAACATGGAAGTGGTGTTTTCAAGTACAAGTTGGTGAGAATGCCAGGACAGCTTAGTGCATTTTCTGTTTGGAAATCAATTGAGAAGTGGAGGGCAGATTCTTCTTCAAGAACTGGACTTATTCTTTTAGATCTCTCTTCAGGGTCTGAGAGTATTCCTGTGTCACTTGTCAATGATGTTGACCATGAGAGATTGCCTGGTGGTTTCACTTATTTTCATTCCCTTAGATTTCCGAAACCCTTCAGCTCAATGCAGTCTTCTAATGGCTGCAACTGTACAAAACCATGTGTCCCTGCTGATCTGAATTGCTCATGTATTCGGAAAAATGAAGGTGATTTTCCATATACTGGCAATGGTGTTCTAGTGAGTCGTAAGCCATTAATTCATGAGTGTGGCCCCACATGTCGTTGTTTCCCTAACTGCAAAAATCGAGTATCCCAGATGGGTTTAAGGCAGGCCTTTGAGGTATTCAAAACAAGGGACAGAGGATGGGGTCTTAGATCATGGGATCCTATTCGTGCTGGTTCTTTTATCTGTGAATATGCTGGAGAAGTTATTGACAAAGGAAACTTAGATCAAAACGAGGAGTTAGCAATGAAAGATGAGTATGCTTTTAATACTAACCGCATTTATCCTCCATTTAAGTGGAATCATACGCCTCAGCTATTGGAAGAAGTGATTTCAGATGACTCTAATGAGGATTATGATATTCCATCTGCTCTAGTTATAAGTGCTAATGAGTGCGGAAATGTGGCTAGATTCATGAATCATAGCTGCTCCCCAAATGTTTTCTGGCAGCCAGTTGTGTATGAAGAAAACAATCAATCCCTCTTGCATATTGCATTTTTCGCTCTCAAACACATTCCACCAATGACAGAGTTGACTTACGACTATGGGATTTCCCATTCTAATCTGTCTGAGGGCAGTGGAATACCCAGAGGTAGAAAAAAATGCTTGTGTGGATCATCAAAGTGCCGTGGTTCTTTTGGTTGA 1992 0.4242 MEGGLGQNSDPPSSSLDKSKILDVKPLRCMLPIFPMSSQGPSSGQYPSGFAPFFPFGGPQESHAWTDLNQHASASEVTLDVPMPTPIRTFRSPIDSTQSEHETLPGSGSRSSKRKAKKSQELLVDLSSVVGISPAQQADGDREVVNFVLMEFDALRRRISQLADAGEFVSGTTKRGDLKSGNVLMTAGIRTNMKKRVGAVPGVEIGDIFFFRMELCVVGLHAQSMGGIDSLTIKGGHEEEPLAVCIVSSYEYDDNADDDDVLIYSGQSGNFGKREKAASDQKLQRGNLALERSSRRHNEVRVIRGMKDVTNPSAKIYVYDGLYKIQESWIEKGKHGSGVFKYKLVRMPGQLSAFSVWKSIEKWRADSSSRTGLILLDLSSGSESIPVSLVNDVDHERLPGGFTYFHSLRFPKPFSSMQSSNGCNCTKPCVPADLNCSCIRKNEGDFPYTGNGVLVSRKPLIHECGPTCRCFPNCKNRVSQMGLRQAFEVFKTRDRGWGLRSWDPIRAGSFICEYAGEVIDKGNLDQNEELAMKDEYAFNTNRIYPPFKWNHTPQLLEEVISDDSNEDYDIPSALVISANECGNVARFMNHSCSPNVFWQPVVYEENNQSLLHIAFFALKHIPPMTELTYDYGISHSNLSEGSGIPRGRKKCLCGSSKCRGSFG 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1326 663 Pfam SAD/SRA domain 197 350 IPR003105 -
Mibi01g1326 663 Pfam Pre-SET motif 379 477 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi01g1326 663 Gene3D SET domain 367 662 IPR046341 -
Mibi01g1326 663 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 181 365 - -
Mibi01g1326 663 ProSiteProfiles YDG domain profile. 198 346 IPR003105 -
Mibi01g1326 663 SMART set_7 485 638 IPR001214 GO:0005515
Mibi01g1326 663 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 95 657 - -
Mibi01g1326 663 MobiDBLite consensus disorder prediction 90 110 - -
Mibi01g1326 663 ProSiteProfiles SET domain profile. 485 632 IPR001214 GO:0005515
Mibi01g1326 663 ProSiteProfiles Post-SET domain profile. 647 663 IPR003616 -
Mibi01g1326 663 MobiDBLite consensus disorder prediction 83 117 - -
Mibi01g1326 663 SUPERFAMILY PUA domain-like 182 368 IPR015947 -
Mibi01g1326 663 SMART G9a_1 193 350 IPR003105 -
Mibi01g1326 663 ProSiteProfiles Pre-SET domain profile. 421 482 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi01g1326 663 MobiDBLite consensus disorder prediction 1 21 - -
Mibi01g1326 663 Gene3D - 181 366 IPR036987 -
Mibi01g1326 663 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 60 663 IPR025794 GO:0016571
Mibi01g1326 663 SMART preset_2 375 469 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi01g1326 663 Pfam SET domain 496 632 IPR001214 GO:0005515
Mibi01g1326 663 SUPERFAMILY SET domain 362 638 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1326 Mibi-ChrMibi01 17269597 17271588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1326 1 663 Su(var)3-9 homologs AT1G73100 52.326 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi01g1326 SAD_SRA 8.7e-48 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g1326 01 17269597 17271588 Mibi07g1659 07 32140976 32142836 CCT