Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1323 ATGAACCAAACAAGCATAGCAGAACATCAAGTCAGCAACAACGAACAAGAACACAAAGGATGTGAGGAGACAAGAGAGCAAATCAAGAACTATATTTGTGGAGGGTGCAAGAACAAAAGGCCTAGATCAATAGGATTATGTAAGAGGCAATTCACATATGCAGAATTGTATGCAGCAACAGAAGGGTTTTCAATTAAGAACTTTCTATCAGAAGGAGGGTGTGGGAAAGTGTACAAAGGGGAGCTTCATAATGGGATGAAGATTGCTGTGAAGCAACAACATATAATGTTGCAAGGGGACAAAGAATTCAAGTCAGAGGTTAATGTACTAAGCAGAGTGAAGCATGAGAATGTTGTTGTCATGTTAGGATTCTGCTCCGAAGGGAATCATAGGCTTCTTGTCTATGAATTTGTATGCAATGGCCCACTCAACCAGCATTTACACCAACACTGCCGGAGACCTCTGAGTTGGGAGAACAGAATAAAAGTAGCAATGGGAACAGCAAGAGGATTACTGTATCTGCATGGAAACAACATTATTCACAGAGACATAACCCCTAATAACATTCTTCTTACTCATGACTTTGAAACAATGCTGGGAGATTTTGGGCTGGCAATTACAACAAGTGATGAGAAAGAGACATCATCAGAAGAATGTGTAGGGGGAGATGAGGATTATGTAGCACCAGAATATGCTGAAGATGGAAAAGTATCCACAAAAACAGATGTTTACTCTTTTGGGGTCGTTCTCTTGCAGCTAATTACTGGCATAAGAACTACTGATAGAAGAAGACTTGGAGAAAGACGAAGCCTTGTGGAATGGGCAAGGCCATTGTTGAGAGAGAAGAAATGTAGGAATGTGATAGATAAGAGGATAATGGAAGATCATGATTGCCATCAGTTGTATTGGATGAGTCGTCTTGCTAAGTCTTGTCTCTCTAAAGATCCTCACAAGCGTTTGACTATGGCCAAGGTGGTAGAAGGCTTGAGTCACATTGCAAAAGGATGCACATGTAATGATAAGATGAAGAACTGTGGTGCCTCCTTCCACACAGATCCATCCTTTCCAAAGCCTCCAACAAGTCAATAA 1089 0.4105 MNQTSIAEHQVSNNEQEHKGCEETREQIKNYICGGCKNKRPRSIGLCKRQFTYAELYAATEGFSIKNFLSEGGCGKVYKGELHNGMKIAVKQQHIMLQGDKEFKSEVNVLSRVKHENVVVMLGFCSEGNHRLLVYEFVCNGPLNQHLHQHCRRPLSWENRIKVAMGTARGLLYLHGNNIIHRDITPNNILLTHDFETMLGDFGLAITTSDEKETSSEECVGGDEDYVAPEYAEDGKVSTKTDVYSFGVVLLQLITGIRTTDRRRLGERRSLVEWARPLLREKKCRNVIDKRIMEDHDCHQLYWMSRLAKSCLSKDPHKRLTMAKVVEGLSHIAKGCTCNDKMKNCGASFHTDPSFPKPPTSQ 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1323 362 MobiDBLite consensus disorder prediction 1 20 - -
Mibi01g1323 362 Gene3D Phosphorylase Kinase; domain 1 33 137 - -
Mibi01g1323 362 ProSitePatterns Tyrosine protein kinases specific active-site signature. 179 191 IPR008266 GO:0004672|GO:0006468
Mibi01g1323 362 ProSiteProfiles Protein kinase domain profile. 63 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1323 362 Gene3D Transferase(Phosphotransferase) domain 1 139 349 - -
Mibi01g1323 362 SUPERFAMILY Protein kinase-like (PK-like) 49 327 IPR011009 -
Mibi01g1323 362 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 138 344 - -
Mibi01g1323 362 PANTHER OS01G0253100 PROTEIN 22 333 IPR045271 -
Mibi01g1323 362 Pfam Protein tyrosine and serine/threonine kinase 65 328 IPR001245 GO:0004672|GO:0006468
Mibi01g1323 362 FunFam Proline-rich receptor-like protein kinase PERK8 23 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1323 Mibi-ChrMibi01 17236637 17240289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1323 51 343 Trihelix Transcription Factor Family AT5G38560 43.377 1.58e-74 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mibi01g1323 PK_Tyr_Ser-Thr 2.5e-48 CL0016