Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1322 ATGTCCTTAGAACTTCAGAGGGTGGTGGTGATCCAGGATACTTCAAGAGATGTGAGTACAACTGCAATAAAAAAGATCCTGAAACAGCTATCTCTAAAACCTGGAGATCAGCTTACAATTCTTGCTACATTTGGGAACAGAATCGTCCAGATGGATTCAACATCATTTATTGCAACAGACCAGAAAATTCTTCAAGAGAAACTTGGCAGGACAAAGGAAGAATATCACAAGAGATCATCACTTATGAAACTTGTTGAGTATTGTCAAGCAAAAAATATTGTTTTCCATATAGAAGTGCTTGCATACCCTTCTCGAGAGGTTACTTGTAATGCTGTCAATACATTTATGGCAACATGCTTGATACTTGACAGACATATGAACAAAGATAAGAGGTACTTCATGGACAATCTAGCTTGTGGTATTTATAGGATAAGGAATCCCTATAGCATTCAAGTGCTAAGGAAGCCAAAACTAACAGAGAACAGCAAATTATTTGCTGAAAGATCAGATCATGCAAGAAATATGGAAGTCAATCCAGGAAGCTTAGCGGAAAATATTTCTCATGAGAGAACCAGATCACCATCAAGTGAGCATCTCATGGAAACCGAAGTTTCAAGTCCTCAGATTTCCAAGGCCCTCAATTCCAGTCATTTTCTAAAATACCAAGAGGAACACAATTTTCCAAAGGATAAACACCAAACATTAGGGAAAGATTCAGTACTTCACATTTCTGAGAGTAAAGAGATAGGCCAAACAGAAGTGCCTCGATTTGAGATGAAAGAAGAGCCCAAAGACCCTCTTTGTTCAGTGTGCAAGAACAAAAGACCAAAAGCTGGATGCATGAGAGACTTCAGTTATTCTGAGCTTTACACAGCCACAAAGGGATTTTCCCAGAAGAACTTTATATCAGAAGGTGGGTTTGGATCAGTATACCAAGGGCAGTTAGATGGAATGGAAATTGCTGTTAAGCAACACAAATGCGCTAGCCTTCAAGGGGAGAAGGAGTTTAAGTCAGAAGTGAATCTATTAAGCAAAGCAAGACATGAGAATGTAATCATGCTGCTGGGGTCATGCTCTGAAGGAAACAATAGGCTTCTTGTTTATGAATTTGTATGCAATGGTTCTCTGGATCAGCACCTGTCTCAACACTCTCGAGCTCCACTTAGATGGGAGGATAGGATTAAAGTAGCTATTGGATCAGCTAAAGGCTTATTATACTTGCATGAGAATGACATCATTCATAGAGATATGAGAACAAACAATATCCTCTTAACACATGATTATCAACCATTGCTGGGAGACTTTGGTTTGGCAAGAATTCAACATCAAAACTCAGTACAGTCTACAGAGGTTGTTGGGACTTTAGGATATTTGGCTCCAGAATATGCAGAATATGGCAAAGTGTCAACTAAGATAGATGTTTATTCTTTTGGGGTAGTCCTATTGCAGCTAATAACTGCAATGAAGACTTCAGACCAAAGACTTAAAGGCCAAAGTCTTGTCGGATGGGCAAGACCACTATTAAGAGAGAGGAATTATCCAGGTCTAATTGACGAAAGGATAATGAACTATCATGATTACCATCAACTATTTTGGATGGTTCGAATTGCAGAGAAATGTTTATGCAGGGACCCTCACAAGAGGTTAAACATGGGTGCGGTGGTGGTTGCTTTGACTCTTGTAGCAGAGGGGAAGATATGTGGGAACATAATCAGATATTACTTTCATGAGATACCAGATTCATTCCACAGCGCATCATCATCTGCAGAAGAAGATGATGAAGAAGTATCATCAGACGATGATGAAATGATGAAAAATACAGAAGATGAGTCAGAAAGTGTCAATGCAGATTCTTGTATCAGCGACATGATGAGCCCCATGGATTTAGGACTCCCTAACCACCCATCATCACCTCCTTTAAATGTGGATGCCACTTTCTTTGGCAGGTTGATTACAGATGAAGAGCATCATGACAAATCAACTACGGATACCCAAGTGGGTGGTATGGTTTCAAGTGATTCCATGGCAAATCATATGGAGGCATAG 2046 0.3969 MSLELQRVVVIQDTSRDVSTTAIKKILKQLSLKPGDQLTILATFGNRIVQMDSTSFIATDQKILQEKLGRTKEEYHKRSSLMKLVEYCQAKNIVFHIEVLAYPSREVTCNAVNTFMATCLILDRHMNKDKRYFMDNLACGIYRIRNPYSIQVLRKPKLTENSKLFAERSDHARNMEVNPGSLAENISHERTRSPSSEHLMETEVSSPQISKALNSSHFLKYQEEHNFPKDKHQTLGKDSVLHISESKEIGQTEVPRFEMKEEPKDPLCSVCKNKRPKAGCMRDFSYSELYTATKGFSQKNFISEGGFGSVYQGQLDGMEIAVKQHKCASLQGEKEFKSEVNLLSKARHENVIMLLGSCSEGNNRLLVYEFVCNGSLDQHLSQHSRAPLRWEDRIKVAIGSAKGLLYLHENDIIHRDMRTNNILLTHDYQPLLGDFGLARIQHQNSVQSTEVVGTLGYLAPEYAEYGKVSTKIDVYSFGVVLLQLITAMKTSDQRLKGQSLVGWARPLLRERNYPGLIDERIMNYHDYHQLFWMVRIAEKCLCRDPHKRLNMGAVVVALTLVAEGKICGNIIRYYFHEIPDSFHSASSSAEEDDEEVSSDDDEMMKNTEDESESVNADSCISDMMSPMDLGLPNHPSSPPLNVDATFFGRLITDEEHHDKSTTDTQVGGMVSSDSMANHMEA 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1322 681 Gene3D Transferase(Phosphotransferase) domain 1 371 567 - -
Mibi01g1322 681 PANTHER OS01G0253100 PROTEIN 202 563 IPR045271 -
Mibi01g1322 681 ProSitePatterns Tyrosine protein kinases specific active-site signature. 412 424 IPR008266 GO:0004672|GO:0006468
Mibi01g1322 681 MobiDBLite consensus disorder prediction 584 615 - -
Mibi01g1322 681 Pfam Protein tyrosine and serine/threonine kinase 299 500 IPR001245 GO:0004672|GO:0006468
Mibi01g1322 681 MobiDBLite consensus disorder prediction 170 208 - -
Mibi01g1322 681 Gene3D Phosphorylase Kinase; domain 1 269 370 - -
Mibi01g1322 681 FunFam Proline-rich receptor-like protein kinase PERK8 258 370 - -
Mibi01g1322 681 MobiDBLite consensus disorder prediction 591 607 - -
Mibi01g1322 681 MobiDBLite consensus disorder prediction 655 681 - -
Mibi01g1322 681 SUPERFAMILY Protein kinase-like (PK-like) 281 556 IPR011009 -
Mibi01g1322 681 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 371 572 - -
Mibi01g1322 681 ProSiteProfiles Protein kinase domain profile. 296 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1322 Mibi-ChrMibi01 17229368 17235490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1322 284 572 Trihelix Transcription Factor Family AT5G38560 46.026 1.39e-76 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mibi01g1322 PK_Tyr_Ser-Thr 5.9e-46 CL0016