Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1310 ATGAAGAAGAAGCTGGATACTCGTTTCCCTGCTGCACGGATTAAAAAGATAATGCAAGCAGATGAAGATGTTGGGAAGATAGCACTAGCAGTGCCTGTTTTAGTTTCTAAAGCTCTAGAGTTGTTTTTGCAAGACCTTTGTGATCGTACATATGAAATAACTCTTCAGAGAGGAGCAAAGACGATGAATGCATTGCATTTAAAACATTGTGTACAAAGCTATAATGTCTTTGATTTTCTGAAGGATGTGGTCAGCAGGGTTCCTGACTATGGCCATGGGCATGGACATGGACATAACCATTCTGACACCGGTGCTGATGATCGGGTCATTCCAAGAAGAAGGAAAGCAGCAAATGATGACCACCATGAGAGTGATGACGACTCTAAGAGAAGCAAGATGCTTGAGACTAGTCATACTGGCAGTAGTGGTAGGGGAAGAGGCCGAGGTAGAGGGAGGGGCCGTGGTCGAGGGGCTCGAAATGTTGAACGGGAAAGAGAGGCTCATCATCAAGAGCCAGAATCTGAACCTTGCACTTCTGCTTTGAACAGCAGCAAACAAAACCCTGATGCAAATGTGGCAATTGATAATGGTTCAGAGCCGAAGGAGTTATCGAAAGAGGGTAATGCAATTCCGGATGAAGGCGCTCAATCTGTTCGTAACATTGATCTGAATGCCAACTTGAATGAAAACGAAGACAAAAATGCTAACACAAGCACCGCGGTAACTGATGCTCCGTTGCCTGATCCTCCAAAACCTGAGACTAAGCATGAAGAAATTCCTGGCTGGTCACTTTCTGATGTGGACAAGATGGTCATTGACTCTATGCAGCTTGCACACCTTGGTAGACAGATAGATGAGGATGATGAAGATTATGATGAAGAAGGGTGA 888 0.4471 MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLKDVVSRVPDYGHGHGHGHNHSDTGADDRVIPRRRKAANDDHHESDDDSKRSKMLETSHTGSSGRGRGRGRGRGRGRGARNVEREREAHHQEPESEPCTSALNSSKQNPDANVAIDNGSEPKELSKEGNAIPDEGAQSVRNIDLNANLNENEDKNANTSTAVTDAPLPDPPKPETKHEEIPGWSLSDVDKMVIDSMQLAHLGRQIDEDDEDYDEEG 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1310 295 MobiDBLite consensus disorder prediction 90 134 - -
Mibi01g1310 295 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Mibi01g1310 295 MobiDBLite consensus disorder prediction 228 261 - -
Mibi01g1310 295 FunFam dr1-associated corepressor homolog 1 86 - -
Mibi01g1310 295 SUPERFAMILY Histone-fold 3 90 IPR009072 GO:0046982
Mibi01g1310 295 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 132 - -
Mibi01g1310 295 MobiDBLite consensus disorder prediction 90 216 - -
Mibi01g1310 295 MobiDBLite consensus disorder prediction 228 243 - -
Mibi01g1310 295 MobiDBLite consensus disorder prediction 155 173 - -
Mibi01g1310 295 MobiDBLite consensus disorder prediction 175 193 - -
Mibi01g1310 295 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1310 Mibi-ChrMibi01 17073099 17076628 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1310 1 284 CCAAT-HAP5 Transcription Factor Family AT3G12480 49.324 9.31e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mibi01g1310 CBFD_NFYB_HMF 1.4e-19 CL0012