Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1303 ATGTCCCCCGCCGCGGCCCCACCCGTCGCCGTCTCCGTCTCCCCCGCCGGCACGAGCCTCGGCTACGGCATCGCCATCGCGGTGAGCATTCTCGTCCTCATTTCCACCATCATGCTCGCCTCTTACGCTTGCGTCCGCATCAAGGCCAACAACCGCGGCCTCAACCGTCGCGTTAGTAGTAGTAATAGTAGCAGTAGTAGTAATAACTCGGACGAGCCTGTGGTGGTGGTTTTGGGCCTGGATAAGCCCACAATTGAAGGCTACCCTGAGATTGTGTTGGGTGAGAGTATGCGATTGCCCAGGCCCAATGGAGGCCCATGTGCTATTTGCTTGGGAGATTATGTGAAGAATGATACGGTGCGGTGCGTTCCAGAGTGTAACCACTGTTTCCACGTGGATTGCTTGGATGAGTGGCTTCGTCTGAGTGCCACGTGTCCTCTTTGTCGGAATTCTCCGGTGCCGTCGCCGGTGGCCACTCCTCTGTCAGAATTGGTTCCACTTGCTTCCCATGACAGGTGA 519 0.5703 MSPAAAPPVAVSVSPAGTSLGYGIAIAVSILVLISTIMLASYACVRIKANNRGLNRRVSSSNSSSSSNNSDEPVVVVLGLDKPTIEGYPEIVLGESMRLPRPNGGPCAICLGDYVKNDTVRCVPECNHCFHVDCLDEWLRLSATCPLCRNSPVPSPVATPLSELVPLASHDR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1303 172 SMART ring_2 107 148 IPR001841 -
Mibi01g1303 172 SUPERFAMILY RING/U-box 106 155 - -
Mibi01g1303 172 Pfam Ring finger domain 107 149 IPR001841 -
Mibi01g1303 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 154 IPR013083 -
Mibi01g1303 172 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Mibi01g1303 172 PANTHER RING-H2 FINGER PROTEIN ATL67 16 170 IPR044289 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1303 Mibi-ChrMibi01 16972583 16973101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1303 16 172 C3H Transcription Factor Family AT5G07040 63.125 6.12e-65 194