Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1283 ATGGCTGATGCCAGTCCTAGGACTGATATTTCTACAGATGTTGAGACTGATGATAAAAATCAGCAGTATGATAGAAATCAATCCCTTGGTGCTGCTGCTTCTGACTCCAGTGACAGATCAAAGGATAAATCAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAATCGTGAGGCAGCAAGAAAAAGCCGATTGAGAAAGAAAGCCTATGTCCAACAGCTGGAAAGCAGTCGTTTGAAGTTGACCCAACTAGAGCAAGAGCTTCAACGAGCTAGGCAGCAGGGGATATTTATATCAAGCTCAGGCGATCAAACAAATGCAATGAGTGGAAATGGGGCTATGGCATTTGATGTAGAATATGCTAGGTGGCTGGAAGAGCAGAATCGCCAAATTAATGAGCTAAGATCAGCTGTAAATTCTCATGCTGGTGATACAGAACTTCGCATGATTGTTGATAACGTATTGGCTCACTATGATGAGATCTTTAGGCTGAAAGGCACTGCAGCTAAGGCTGATGTTTTCCATTTGTTATCCGGCATGTGGAAAACACCTGCAGAGAGATGTTTTTTATGGCTTGGTGGCTTTCGATCATCTGAACTCCTCAAGCTCCTGATAACTCAATTGGAACCTCTGACAGAGCAACAGCTGGTTGGCATTACCAACTTGCAGCAATCCTCTCAACAAGCAGAAGATGCATTATCTCAGGGTATGGAAGCTTTGCAACAATCCCTAGCCGAGACATTATCCAGTGGATCTCTCGGATCTTCTGGTTCGTCGGGGAACGTGGCAAATTACATGGGCCAAATGGCTATGGCCATGGGAAAGCTAGGCACACTTGAGGGTTTCATTCGACAGGCTGACAATTTGCGGCAGCAAACACTGCAACAAATGCACCGTATATTGACGACTCGCCAATCAGCTCGGGCTCTTCTTGCCATACATGATTACTTCTCACGACTTCGTGCTCTTAGTTCCCTCTGGCTGGCTCGCCCAAGAGATTGA 999 0.4595 MADASPRTDISTDVETDDKNQQYDRNQSLGAAASDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQTNAMSGNGAMAFDVEYARWLEEQNRQINELRSAVNSHAGDTELRMIVDNVLAHYDEIFRLKGTAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLITQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1283 332 Coils Coil 123 143 - -
Mibi01g1283 332 ProSiteProfiles DOG1 domain profile. 112 329 IPR025422 GO:0006351|GO:0043565
Mibi01g1283 332 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700|GO:0006355
Mibi01g1283 332 SMART brlzneu 43 106 IPR004827 GO:0003700|GO:0006355
Mibi01g1283 332 Pfam Seed dormancy control 129 204 IPR025422 GO:0006351|GO:0043565
Mibi01g1283 332 Coils Coil 66 93 - -
Mibi01g1283 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
Mibi01g1283 332 MobiDBLite consensus disorder prediction 1 49 - -
Mibi01g1283 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700|GO:0006355
Mibi01g1283 332 Gene3D - 46 98 - -
Mibi01g1283 332 FunFam BZIP family transcription factor 46 95 - -
Mibi01g1283 332 Pfam Basic region leucine zipper 43 89 IPR004827 GO:0003700|GO:0006355
Mibi01g1283 332 PANTHER TRANSCRIPTION FACTOR TGA9 14 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1283 Mibi-ChrMibi01 16667908 16671163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1283 1 332 bZIP Transcription Factor Family AT3G12250 80.120 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi01g1283 DOG1 6.5e-33 No_clan