Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1278 ATGACCCCACAGAGTTCTCACTTGTCCAAGCGAAATGCACATGAATCAGAAGAAGAAAGTCCAAACAAATTGATGAAGCAAGAGGCAGCGGGATACATCTTTTCAGAGCTGAAGCATGAAACTCCTGGAGAAGCTTCCAATGATGAAGATGATTCTGTCGGCCTTGATCTGACGGAAAATATGAAAGTCCCTTGTTGTTCCGTTTGCCAAACGCGGTACAACGAAGAGGAGAGAGTCCCTCTTCTTCTCCAATGCGGACATGGGTTTTGCAGACAGTGTTTATCGAAAATGTTCTCGGCGTCTCTCGATACTACGTTGCCTTGTCCCAAGTGTCGCCACGTGTCCAATGTCGGGAACTCTGTTCAATCTCTTCGCAAGAATTACACTATTCTCGCGCTTATTCACTCAGCTTCAAACGCGTCCCGTTCGAATTTCGACGGCGACTTCACTGACGATGAAGAAGATGAAGACAATGAAGATGGGTCCCAGACATCGAGCTCAGGTAGGTGTGGGCCCGTGATCGATGTTGGCGTGCACCGGGAATTGAAATTCCTACGGCGGATTGGTGAGGGGAGGAGGGCAGGGATGGACACGTGGACGGCGGTGATTAGTGGACAGTGCAAGCACTATGTGGCAGTGAAGAAGGTAGGGATGACGGATGAGATGGATTTGAATTGGGTGCGTGGACAGCTTGAGAACTTGCGTCGTGCATCGATGTGGTGTAGAAATGTGTGCACTTTTCATGGGGTTATGGAGGTGGACAACAGTTTGTGTCTTGTGATGGACCGGGGTTATGGATCGGTTCAGTCTGAGATGCAGCGCAATGAGGGGAGACTTACTTTGGAGCAAATCTTAAGGTATGGGGCTGACATTGCACGAGGGGTGGCTGAGCTGCATGCTGCAGGTGTTGTTTGCATGAATCTAAAGCCATCTAATCTTCTTCTTGATGCAAATGGTCATGCGGTGGTTTCTGATTATGGACTTGCTGGAATTCTGAAGAAGCCTTCCTGTTGGAAGACCCAACCTGAGTGTGACTCATCAAGGACCCATTCATGTATGGAATGTATGATGCTCAGCCCACATTACTCGGCTCCAGAGGTTTGGGAGCCTGTGAAGAAGTCAAATTTATTTAGGGCTGATTCTATAGGTGTATCCACAGAGTCGGATGCTTGGAGTTTTGGTTGTACTTTGGTGGAAATGTGCACGGGTTTTGTTCCTTGGACTGGTCGAAGTGCGGAGGAAATTTATCAAGCCATTGTCAAGGCACGAAAATTGCCCCCACAGTACGCTTGTATTGTTGGAGGTGGAATACCTAGGGAATTATGGAAGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGACCTAGTTTTAGTGCAATGTTAGCTGTGTTTCTCCATCATTTGCAGAAAATACCATATAGTCCTGCTACAAGCCCCGATAAGGTCTCTGTTGAATGCTCTGTGTCAAATGTGCTAGAAGCTTCCCCTCAAGCATTTGAATTGAAAGTTCCTCAAGATTATGTGAATCATCTTCATCGGCTTGTATCTGAAGGGAATGCTCGGGGTGTTAGACATCTCCTTGCAAAGGCTGTCTCAGTCAATGGTAGCAACTATATATCTTCTCTATTAGAAGCTCAAAATGCTGATGGGCAAACGGCTCTTCACTCAGCTTGTAGGCGTGGCAGTGCAGAACTTGTTGAGGCTATTTTAGCATGCAAAGAGGCAGATGTTGATGTCTTGGACAAAAATGGTGTTCCCCCACTTGCTTTTGCTTTAGCAGCTGGATCTCCAGAATGTGTTCGTAGCCTTATCAAAAGAAATGCTAATGTGAGGTCTCGATTAAAAGATGGCTTTGGCCCATCTATTGCTCACATTTGTGCCTATCATGGCCAACCAGAGTGCATGCGAGAACTGGTATTGGCTGGAGCGGATCCAAATGCAGTTGACGACCAAGGTGAATCTATATTGCATTGTGCAGTTGCCAAGAGGTATACAGATTGTGCTCTGGTGATACTAGAAAATGGGGGCTGCAGATCAATGGCGATCTTAAATTCAAAGAATCTGACACCGTTGCACCTGTGTGTGGAAACAAGGAATGTGGCTATTGTGAAAAAATGGGTGGAAGTTGCAACATCTGATGAGATTGCTGAAGCAATTGACATTCCAAACCCCATTGGCACTGCATTGTGCATGGCAGCTGCATCTAAAAAAGATCATGCAATTGAGGGGAGGGAACTGGTACGAATATTGCTTGCTGCAGGTGCTGACCCATCGGCTCAAGATTCGCAGTATGGGTGTACAGCGTTGCATACAGCTGTCAAATCTAATGATGTTGAGCTGGTTAAGGTTATTCTTTCTGCTGGTGTTGATGTGAACATCCGTAATGAGCAAAATAGTACACCTCTTCACTTGGCTTTAACTAGTGGAGCGAAGTCATGCATTAAATTGCTTCTATCTGCTGGAGCAAACTATAATGTGCAGGATGATGATGGTGACAATGCTTTGCACAAAGCGGCAAAGGCGGCAAAGCTGGCACGTGAAAACCTTGACTGGCTCATTGTTATGCTAAGAAATCCTGATGCTGATGTTCACGTCAGAAACCACAGTGGAAGGACCTTACGTGACATATTGCAGGCCCTTCCCCGGGAATGGATATCTGAGGACCTGATGGAGGCTCTCATGTATAGAGGAGTTCATCTTACTCCTACAATGTTTGAAGTGGGTGATTGGGTGAAGTTCAAACGAACTGTCAAAAATCCTACTTATGGGTGGCAAGGTGCTAATTCAAAGAGCGTTGGCTTTGTGCAAAGTGTTCCAAGCCGAGACAATCTCATTGTTTCATTTTGTTCTGGAGACGCTCATGTTTTAGCAAATGAAGTTGTGAAAGTTATTCCATTAGACAGGGGTCAACATGTACAGCTTAAATCAGAGGTTAAAGAGCCCAGGTTTGGTTGGCGAGAACAATCACGTGACAGCATAGGCACAGTATTATGCATTGATGATGATGGAATCCTACGTGTTGGCTTTCCTGGGGCATCCAGAGGATGGAAAGCTGACCCAGCAGAGATGCAACGGGTTGAGGAATTCAAGGTTGGAGACTGGGTTCGCATTCGTCCAACTCTTACATCCACAAAGCATGGGCTAGGGTCTGTGGCCCCAGGAAGCATTGGTATTGTATCTTCTATCAGACCAGACAGTAGCCTACTGATAGAACTCAGCTATCTTGCAACTTCGTGGCATTGTGAACCAGAAGAGGTTGAGCATGTTGCTCCTTTCAGGATTGGAGATCGGGTATGTGTGAAGCGATCCGTAGCAGAACCTAGATGTGCTTGGGGAGGTGAGACTCATCATAGTGTTGGAAGGATCATTGAGATTGAGAATGACGGTCTCTTAATAATTGAAATACCAAACCGACCAATACCATGGCAAGCTGATCCATCTGATATGGAGAAGCTGGAAGATTTTAAGGTTGGAGATTGGATCAAAATAAAATCTTCAGTGCCTTCCCCAAAATATGGATGGGAGGATGTTACTAGGAGCAGTATTGGGGTAATCCATAGCTTGGAGGAAGACGGTGATATGGGTATTGCTTTCTGCTTCAGAAGCAAACCTTTTAATTGCTCTGTCACTGATGTGGAGAAAGTGCCACCTTTAGAGGCAGGGCAAGAAATTCATGTGATGCCATCTGTTATTCAGCCCCGGCTTGGATGGTCTAATGAATCACCAGCTACTGTTGGAAAAATAGTGACAATTGACATGGATGGTGCTCTCAATGTGAAAGTCACAGGCAGGCAGAGCTTATGGAAAGTTTCTCCTGGAGATGTAGAACAACTTTCGGGATTTGAAGTTGGTGATTGGGTACGTTCAAAACCAAGCATAGGAACCAGACCAAGTTATGATTGGAATGGTGCTGTGAAGGATGGTATAGCAGTTGTACACAGTGTGCAAGATTCTGGATACTTGGAATTGGCTTGCTGTTTTCGTAAATTGAAGTACTTGACTCATTATACAGATGTTGAAAAGGTTCCTTGCTTTAAAGTTGGGCAGTATGTTAGGTTCCGAACTGGTTTGGTTGAACCAAGGTGGGGCTGGAGAGGTGCTCAAGCCAAATCTCGAGGCGTTATAACCAGCATTCATGCTGATGGAGAAGTAAGAGTATTATTCTTTGGTTTGCCAGGTTTGTGGAGAGGAGATCCTGCTGACCTTGAGATTGAGCAGATGTTTGAAATGGGAGAGTGGGTAAGGTTGAAAGATAGTGCAAATAGGTGGAAATCCATTGGACCGGGCAGCATTGGTATTGTACAAGGAATAGGATTTAATGGTGATGAATGGGACGGAAGCACTTGTGTTGGTTTTTGTGGGGAGCAAGAAAGTTGGGTTGGACCAACTTCCCATCTTGAAAGAGTTGATAAACTCTCTGTCGGGCAGAAGGTTAGAGTTAAGCAAAGTGTAAAGAATCCAAGATTTGGTTGGGCAGGGCAGACCCACACTGTTGTTGGAACCATATCAGCAATTGATGCCGATGGAAAGCTTCGAATATACACTCCACCAGGATCAAAAGCATGGATGTTGGACCCATCAGAAGTAGAATTAGTGGAGGAGGAGGAGGAGATACAAATTGGAGACTGGGTGAAAGTTAGAGCATCAGTTTCAACCCCAACCCACCAGTGGGGAGAAGTGGGACACTCTAGCATCGGGGTGGTACATCGGATGGAAGGCGAAGATCTGTGGGTGTCATTCTGCTTCACGGAGAGGCTATGGCTTTGTAAGGCATGGGAAATGGAAAGGGTGAGGCCATTCAAAATTGGGGATAAGGTAAGGATCAGAGATGGACTTGTGAGTCCAAGATGGGGATGGGGAATGGAGACACATGCTAGCAAGGGAGAGGTGGTAGGGGTAGATGCTAATGGAAAACTAAGGATAAAATTTAGGTGGAGGGAAGGGAAGCCCTGGGTGGGAGACCCTGCTGATATAGTTCTTGATGAGAAGTGA 4998 0.4588 MTPQSSHLSKRNAHESEEESPNKLMKQEAAGYIFSELKHETPGEASNDEDDSVGLDLTENMKVPCCSVCQTRYNEEERVPLLLQCGHGFCRQCLSKMFSASLDTTLPCPKCRHVSNVGNSVQSLRKNYTILALIHSASNASRSNFDGDFTDDEEDEDNEDGSQTSSSGRCGPVIDVGVHRELKFLRRIGEGRRAGMDTWTAVISGQCKHYVAVKKVGMTDEMDLNWVRGQLENLRRASMWCRNVCTFHGVMEVDNSLCLVMDRGYGSVQSEMQRNEGRLTLEQILRYGADIARGVAELHAAGVVCMNLKPSNLLLDANGHAVVSDYGLAGILKKPSCWKTQPECDSSRTHSCMECMMLSPHYSAPEVWEPVKKSNLFRADSIGVSTESDAWSFGCTLVEMCTGFVPWTGRSAEEIYQAIVKARKLPPQYACIVGGGIPRELWKMIGECLQFKPSKRPSFSAMLAVFLHHLQKIPYSPATSPDKVSVECSVSNVLEASPQAFELKVPQDYVNHLHRLVSEGNARGVRHLLAKAVSVNGSNYISSLLEAQNADGQTALHSACRRGSAELVEAILACKEADVDVLDKNGVPPLAFALAAGSPECVRSLIKRNANVRSRLKDGFGPSIAHICAYHGQPECMRELVLAGADPNAVDDQGESILHCAVAKRYTDCALVILENGGCRSMAILNSKNLTPLHLCVETRNVAIVKKWVEVATSDEIAEAIDIPNPIGTALCMAAASKKDHAIEGRELVRILLAAGADPSAQDSQYGCTALHTAVKSNDVELVKVILSAGVDVNIRNEQNSTPLHLALTSGAKSCIKLLLSAGANYNVQDDDGDNALHKAAKAAKLARENLDWLIVMLRNPDADVHVRNHSGRTLRDILQALPREWISEDLMEALMYRGVHLTPTMFEVGDWVKFKRTVKNPTYGWQGANSKSVGFVQSVPSRDNLIVSFCSGDAHVLANEVVKVIPLDRGQHVQLKSEVKEPRFGWREQSRDSIGTVLCIDDDGILRVGFPGASRGWKADPAEMQRVEEFKVGDWVRIRPTLTSTKHGLGSVAPGSIGIVSSIRPDSSLLIELSYLATSWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRCAWGGETHHSVGRIIEIENDGLLIIEIPNRPIPWQADPSDMEKLEDFKVGDWIKIKSSVPSPKYGWEDVTRSSIGVIHSLEEDGDMGIAFCFRSKPFNCSVTDVEKVPPLEAGQEIHVMPSVIQPRLGWSNESPATVGKIVTIDMDGALNVKVTGRQSLWKVSPGDVEQLSGFEVGDWVRSKPSIGTRPSYDWNGAVKDGIAVVHSVQDSGYLELACCFRKLKYLTHYTDVEKVPCFKVGQYVRFRTGLVEPRWGWRGAQAKSRGVITSIHADGEVRVLFFGLPGLWRGDPADLEIEQMFEMGEWVRLKDSANRWKSIGPGSIGIVQGIGFNGDEWDGSTCVGFCGEQESWVGPTSHLERVDKLSVGQKVRVKQSVKNPRFGWAGQTHTVVGTISAIDADGKLRIYTPPGSKAWMLDPSEVELVEEEEEIQIGDWVKVRASVSTPTHQWGEVGHSSIGVVHRMEGEDLWVSFCFTERLWLCKAWEMERVRPFKIGDKVRIRDGLVSPRWGWGMETHASKGEVVGVDANGKLRIKFRWREGKPWVGDPADIVLDEK 1665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1278 1665 Pfam Protein kinase domain 185 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1278 1665 ProSiteProfiles Ankyrin repeat profile. 799 831 IPR002110 GO:0005515
Mibi01g1278 1665 SUPERFAMILY Ankyrin repeat 546 874 IPR036770 -
Mibi01g1278 1665 ProSiteProfiles Ankyrin repeat profile. 551 584 IPR002110 GO:0005515
Mibi01g1278 1665 MobiDBLite consensus disorder prediction 1 25 - -
Mibi01g1278 1665 SUPERFAMILY RING/U-box 65 117 - -
Mibi01g1278 1665 SMART ring_2 66 111 IPR001841 -
Mibi01g1278 1665 MobiDBLite consensus disorder prediction 144 173 - -
Mibi01g1278 1665 ProSiteProfiles Ankyrin repeat profile. 585 617 IPR002110 GO:0005515
Mibi01g1278 1665 Gene3D - 488 681 IPR036770 -
Mibi01g1278 1665 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 61 1664 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Mibi01g1278 1665 PRINTS Ankyrin repeat signature 552 567 IPR002110 GO:0005515
Mibi01g1278 1665 PRINTS Ankyrin repeat signature 815 829 IPR002110 GO:0005515
Mibi01g1278 1665 ProSiteProfiles Ankyrin repeat region circular profile. 766 798 - -
Mibi01g1278 1665 Pfam Ankyrin repeats (3 copies) 626 706 IPR002110 GO:0005515
Mibi01g1278 1665 Pfam Ankyrin repeats (3 copies) 514 613 IPR002110 GO:0005515
Mibi01g1278 1665 Pfam Ankyrin repeats (3 copies) 744 830 IPR002110 GO:0005515
Mibi01g1278 1665 ProSiteProfiles Protein kinase domain profile. 182 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1278 1665 Pfam Mind bomb SH3 repeat domain 1541 1659 IPR040847 -
Mibi01g1278 1665 Pfam Mind bomb SH3 repeat domain 1157 1277 IPR040847 -
Mibi01g1278 1665 Pfam Mind bomb SH3 repeat domain 907 1025 IPR040847 -
Mibi01g1278 1665 Pfam Mind bomb SH3 repeat domain 1410 1531 IPR040847 -
Mibi01g1278 1665 Pfam Mind bomb SH3 repeat domain 1283 1404 IPR040847 -
Mibi01g1278 1665 Pfam Mind bomb SH3 repeat domain 1031 1151 IPR040847 -
Mibi01g1278 1665 ProSiteProfiles Ankyrin repeat region circular profile. 799 831 - -
Mibi01g1278 1665 ProSiteProfiles Zinc finger RING-type profile. 66 112 IPR001841 -
Mibi01g1278 1665 SMART ANK_2a 585 614 IPR002110 GO:0005515
Mibi01g1278 1665 SMART ANK_2a 832 867 IPR002110 GO:0005515
Mibi01g1278 1665 SMART ANK_2a 766 795 IPR002110 GO:0005515
Mibi01g1278 1665 SMART ANK_2a 653 684 IPR002110 GO:0005515
Mibi01g1278 1665 SMART ANK_2a 551 581 IPR002110 GO:0005515
Mibi01g1278 1665 SMART ANK_2a 508 537 IPR002110 GO:0005515
Mibi01g1278 1665 SMART ANK_2a 726 761 IPR002110 GO:0005515
Mibi01g1278 1665 SMART ANK_2a 799 828 IPR002110 GO:0005515
Mibi01g1278 1665 SMART ANK_2a 620 649 IPR002110 GO:0005515
Mibi01g1278 1665 SMART ANK_2a 688 719 IPR002110 GO:0005515
Mibi01g1278 1665 ProSiteProfiles Ankyrin repeat profile. 620 652 IPR002110 GO:0005515
Mibi01g1278 1665 ProSiteProfiles Ankyrin repeat region circular profile. 551 584 - -
Mibi01g1278 1665 ProSiteProfiles Ankyrin repeat profile. 766 798 IPR002110 GO:0005515
Mibi01g1278 1665 Gene3D Transferase(Phosphotransferase) domain 1 177 472 - -
Mibi01g1278 1665 Gene3D - 682 805 IPR036770 -
Mibi01g1278 1665 Gene3D - 806 904 IPR036770 -
Mibi01g1278 1665 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 146 IPR013083 -
Mibi01g1278 1665 MobiDBLite consensus disorder prediction 10 24 - -
Mibi01g1278 1665 SUPERFAMILY Protein kinase-like (PK-like) 179 467 IPR011009 -
Mibi01g1278 1665 ProSitePatterns Zinc finger RING-type signature. 85 94 IPR017907 -
Mibi01g1278 1665 Pfam RING-type zinc-finger 66 109 IPR027370 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1278 Mibi-ChrMibi01 16612213 16624931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1278 211 470 MAP Kinase Kinase Kinase AT4G18950 27.138 8.60e-19 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Mibi01g1278 Pkinase 2.7e-30 CL0016