Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1248 ATGGCTGCACAGACACAGTTCCATGTTTTGGTTGTTGATGACAGTCTGATTGATAGAATATTGATTGAGAGGCTCCTCAAAACCTCTTCTTATCGTGTAACTGCAGTGGAATCTGGCAGCAAGGCTTTGAGGTTTCTGGGTTTGCAAGAGGATGGTGAAATGAAAGTGGAGACTGCCACTGTTCCTGCAGAAGGCCATCAGGATGTGGAGGTAAATTTGATTATCACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTCACCAGAAAAATCAAGGAATCTAAATCTCTTAGAGATATACCTGTGGTGATTATGTCCTCAGAAAATGAGCCATCAAGGATCAACAGATGCTTAGAAGAAGGAGCTGAAGAATTCTTTCTCAAACCAGTTCAACAATCAGATGTAAACAAGCTAAAGCCTCATCTGCTAAGATCAAAAGTCAAGGAAGATGAAGACCAACTCATGAATAATAAGAGAAATGACATGGAAGAGAGTCATTCTCAAGATAAATTTAGACTAAAAATATAG 531 0.3936 MAAQTQFHVLVVDDSLIDRILIERLLKTSSYRVTAVESGSKALRFLGLQEDGEMKVETATVPAEGHQDVEVNLIITDYCMPEMTGYDLTRKIKESKSLRDIPVVIMSSENEPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLRSKVKEDEDQLMNNKRNDMEESHSQDKFRLKI 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1248 176 ProSiteProfiles Response regulatory domain profile. 8 144 IPR001789 GO:0000160
Mibi01g1248 176 SUPERFAMILY CheY-like 6 152 IPR011006 -
Mibi01g1248 176 Pfam Response regulator receiver domain 9 136 IPR001789 GO:0000160
Mibi01g1248 176 Gene3D - 8 174 - -
Mibi01g1248 176 CDD REC_typeA_ARR 9 139 - -
Mibi01g1248 176 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 160 IPR045279 GO:0009736
Mibi01g1248 176 MobiDBLite consensus disorder prediction 149 176 - -
Mibi01g1248 176 SMART REC_2 7 143 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1248 Mibi-ChrMibi01 16102845 16104039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1248 1 149 Response Regulator Gene Family AT3G57040 68.000 1.28e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi01g1248 Response_reg 3.2e-20 CL0304