Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1208 ATGACAACACCCACTTTCTTTTCCATCCCCTTCCTGCTATTTTCCTTCCTCTGCTTCACTTCAACTCTCTCCACTTCCTTCTCTGACCTCCATGCCCTTCTCAAGCTCAAATCTTCCCTCAAAGGACCCAAAGCTTCACCTTCTGCCATGGAAGATTGGAACCCCTCTGTAATTTCTCCCTCTGCTCACTGCAAATTCTCTGGAATCACATGCGATGATAATTTCAGAGTTGTCTCTTTGAATGTCTCTTTTCATCCCCTGTATGGTTCTATTCCACCAGAGATTGGCCTACTCAACAATCTCATCTCTCTCACCCTCTCACAAAACAATCTCACAGGCGAGCTTCCAAAACAATTCTCCAATCTCACTTCTCTGAAAGTCCTCAACATTTCACACAACTCCCTCACCGGAATCTTCCCCGGTGAAATCACTCTCAACATGACTCAGCTTGAGGTTCTAGACGTTTATGACAACAGCTTCAACGGCACCTTACCAGAGGAGGTAGTGAAACTGAAGAACCTGAGGCATCTCTGTTTCGCCGGGAACTACTTTTCCGGCGAGATACCGGAGAGTTATTCGGAGTTCGAGAGCTTGGAGGCTCTGCTGCTGAATGAAAACAGCCTGAGAGGGAAAATCCCAGCGAGTTTAGCGAAATTGAAGAAACTCAGGAAGTTGTTCTTGGGGTATAGTAATGTTTACATCGGTGGTATCCCACCGGAGTTAGGAACGATGAGTAATCTTCACAGGATCGATTTAGGAGGATGTAATTTATCAGGTGAGATTCCACCTAGCTTGGGGAATTTGAAGAACCTAGATACTCTGTTTCTTCAGATGAACAACCTCACTGGAGAAATCCCACCTGAACTTTCCGGTATGACTAGCCTCATGTCGCTTGATTTATCCATCAACAGCCTCACCGGAGAAATACCCTCCAGTTTTTCTGAGCTAAAGAACTTAACTTTGATCAATTTATATGAAAACAAGCTTCTTGGCTCTATCCCATCATTCATCGGAGACCTTCCTTATCTTGAAGTTCTTCTGATTTGGGAGAACAATTTCTCCTACATCTTACCTCAAAATCTCGGAAGCAACGGGAAATTCAAGAAAATCGATGTCGCAGGCAATCACTTCGCTGGTTTGGTCCCAAAAGATTTGTGTAAAGGAGGAAAGTTGGATACTTTCATCATAATGAACAATTCCTTCGACGGTTCAATCCCTGAGGAACTCGGTGAGTGTAAGTCTTTGGAGAAAGTTCGAATTTCTAACAATTTCCTCACTGGTTCGATCCCACCTGGGATTTTCAATCTTCCTTCTGTCACAATGATCGATCTCAGTAACAACATGTTAACCGGCGAGCTGCCTTCAGATATGTCAGGCAATCTCATCGGGATTCTCACACTTTCCAATAATCTCCTCACCGGAAAAATCCCTCCGGCGATCGGGAATCTCCGAAGCTTACAGAATCTCGCACTAGATGTGAACCACTTTGTTGGTGATATTCCAGAAGAAATGTTCAATTTGCCTATGTTAACGAAAGTTAACATAAGCTTCAACAATCTCACTGGTTCGATTCCTGATTCTATCACACACTGTGCTTCGTTGACCGCCGTTGACCTCAGCCGGAACGAGATCACCGGAGAAATCCCGAGAGAAATCAATAACATGACAGTTCTCAGCATCCTCAATCTCTCAATGAATCACCTAACAGGTTCAATCCCAGAAAAGATCAGTTCCATGGTGAGTTTAACAACACTTGATCTCTCTGATAACAATCTCGAAGGAAGAATCCCCACCGGCGGCCAATTCAGTGTCTTTTCCGGCGAGACCTTCGCCGGAAACCCAAAACTCTGTTTCCCAAATGCCCATTCTTGCAAAACCAACCACAAGAAGCCAGTAAAATCAACCAACATCATAGCCATAACAATCGCCCTCCTCACCACACTCCTCCTCATAGCCATCACAATCTACACACTCAGAAAAAGATGGCACAACAAGTCTCTCACATGGAAGCTCACACTGTTCCGTCGCCTGAACTTCAAGGCCGATGACGTGTTGGAATGCCTAAAGGACGAGAACATAATCGGGAAAGGTGGTGCCGGGATTGTGTACAGGGGTACCACAAAAGATGGCACCGATGTTGCCATAAAGAGACTGGTGGGCCCGGGTCTAAATGGGAGGAACGATTATGGGTTCAAGGCGGAGATAGAGACATTGGGGAGAATTAGGCATAGGAACATAGTGAGGCTATTGGGGTATGTGTCAAATAAAGATACGAATTTATTGGTGTATGAGTATATGAGTAATGGGAGTTTAGGGGAATGGTTACATGGGGCAAAAGGGGGGCATTTGCAGTGGGAGGCTAGGTATAAGATTGCGGTTGAGGCAGCTAAGGGGTTGTGTTATCTTCATCATGATTGTTCGCCTGGGATAATACATAGGGATGTGAAGTCGAATAATATATTGTTGGATGCTGATTTTGAAGCTCATGTTGCTGACTTTGGTTTGGCTAAGTTCCTTCTTGATCCTGGTGCTTCTCAGTCTATGTCTTCCATTGCTGGCTCTTACGGCTACATCGCTCCAGAGTACGCTTACACACTAAAAGTGGATGAGAAAAGTGATGTGTATAGTTTTGGAGTGGTACTTCTGGAGTTGATAGTGGGGAGGAAGCCAGTGGGTGAGTTCGGCGATGGCGTGGACATTGTCGGGTGGGTGAAGAACAAGACCTCGGAGCTGCCTCCTCCACCGTCGGAAGCCGCCATGGTGATGGCGGTGGTGGACCCCAGGCTAACAGGGTATCCTCTCACCGGCGTCATTCACATGTTCAAGATAGCCATGATGTGTGTGGAAGAGAAAGGCACTTCTAGGCCCACTATGAGAGAAGTCGTTCATATGCTCACCAATATTAATCCTCCCGATCTCATTCACCTCTAA 2931 0.4568 MTTPTFFSIPFLLFSFLCFTSTLSTSFSDLHALLKLKSSLKGPKASPSAMEDWNPSVISPSAHCKFSGITCDDNFRVVSLNVSFHPLYGSIPPEIGLLNNLISLTLSQNNLTGELPKQFSNLTSLKVLNISHNSLTGIFPGEITLNMTQLEVLDVYDNSFNGTLPEEVVKLKNLRHLCFAGNYFSGEIPESYSEFESLEALLLNENSLRGKIPASLAKLKKLRKLFLGYSNVYIGGIPPELGTMSNLHRIDLGGCNLSGEIPPSLGNLKNLDTLFLQMNNLTGEIPPELSGMTSLMSLDLSINSLTGEIPSSFSELKNLTLINLYENKLLGSIPSFIGDLPYLEVLLIWENNFSYILPQNLGSNGKFKKIDVAGNHFAGLVPKDLCKGGKLDTFIIMNNSFDGSIPEELGECKSLEKVRISNNFLTGSIPPGIFNLPSVTMIDLSNNMLTGELPSDMSGNLIGILTLSNNLLTGKIPPAIGNLRSLQNLALDVNHFVGDIPEEMFNLPMLTKVNISFNNLTGSIPDSITHCASLTAVDLSRNEITGEIPREINNMTVLSILNLSMNHLTGSIPEKISSMVSLTTLDLSDNNLEGRIPTGGQFSVFSGETFAGNPKLCFPNAHSCKTNHKKPVKSTNIIAITIALLTTLLLIAITIYTLRKRWHNKSLTWKLTLFRRLNFKADDVLECLKDENIIGKGGAGIVYRGTTKDGTDVAIKRLVGPGLNGRNDYGFKAEIETLGRIRHRNIVRLLGYVSNKDTNLLVYEYMSNGSLGEWLHGAKGGHLQWEARYKIAVEAAKGLCYLHHDCSPGIIHRDVKSNNILLDADFEAHVADFGLAKFLLDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWVKNKTSELPPPPSEAAMVMAVVDPRLTGYPLTGVIHMFKIAMMCVEEKGTSRPTMREVVHMLTNINPPDLIHL 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1208 976 ProSiteProfiles Protein kinase domain profile. 688 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1208 976 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 766 975 - -
Mibi01g1208 976 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Mibi01g1208 976 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 657 765 - -
Mibi01g1208 976 SMART LRR_typ_2 316 340 IPR003591 -
Mibi01g1208 976 SMART LRR_typ_2 268 292 IPR003591 -
Mibi01g1208 976 SMART LRR_typ_2 436 460 IPR003591 -
Mibi01g1208 976 SMART LRR_typ_2 579 612 IPR003591 -
Mibi01g1208 976 SMART LRR_typ_2 147 171 IPR003591 -
Mibi01g1208 976 SMART LRR_typ_2 483 507 IPR003591 -
Mibi01g1208 976 SMART LRR_typ_2 122 145 IPR003591 -
Mibi01g1208 976 SMART LRR_typ_2 98 121 IPR003591 -
Mibi01g1208 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Mibi01g1208 976 Gene3D Ribonuclease Inhibitor 397 632 IPR032675 -
Mibi01g1208 976 Gene3D Phosphorylase Kinase; domain 1 660 765 - -
Mibi01g1208 976 SUPERFAMILY RNI-like 79 402 - -
Mibi01g1208 976 SUPERFAMILY Protein kinase-like (PK-like) 683 966 IPR011009 -
Mibi01g1208 976 FunFam LRR receptor-like serine/threonine-protein kinase EFR 337 630 - -
Mibi01g1208 976 Pfam Leucine Rich Repeat 246 268 IPR001611 GO:0005515
Mibi01g1208 976 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 232 336 - -
Mibi01g1208 976 Gene3D Transferase(Phosphotransferase) domain 1 766 972 - -
Mibi01g1208 976 SMART serkin_6 688 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1208 976 Pfam Leucine Rich repeat 581 594 IPR001611 GO:0005515
Mibi01g1208 976 Gene3D Ribonuclease Inhibitor 190 285 IPR032675 -
Mibi01g1208 976 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 236 967 - -
Mibi01g1208 976 FunFam Leucine-rich repeat receptor-like protein kinase 27 190 - -
Mibi01g1208 976 Gene3D Ribonuclease Inhibitor 286 388 IPR032675 -
Mibi01g1208 976 Pfam Leucine rich repeat N-terminal domain 28 72 IPR013210 -
Mibi01g1208 976 Pfam Leucine rich repeat 100 142 IPR001611 GO:0005515
Mibi01g1208 976 Pfam Leucine rich repeat 484 544 IPR001611 GO:0005515
Mibi01g1208 976 Pfam Protein kinase domain 690 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1208 976 SUPERFAMILY RNI-like 347 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1208 Mibi-ChrMibi01 15666340 15670044 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1208 26 971 Receptor kinase-like Gene Family AT1G75820 63.770 0.0 1223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi01g1208 Pkinase 1.2e-42 CL0016