Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1156 ATGGAGCAGTACCTCCGAGACAACTTCCATGTCTCCTCCAAGCGTTCCTCCGACGCCGCCCTCCGCCGCTGGAGATCCGCAGTCTCCGTCGTCAAGAATCCTCGCCGCCGCTTTCGCATGGTCGCCGATCTCGCCAAGCGCGCCCACGCTGAGCAGAAGCGTAAGAACCTCCAGGAAAAAGTACGACTAGCTCTCTATGTGCAAAAAGCAGCGTTGCAGTTTATTGATGAATTTAACTTCTCCTCTCACACAGCTGGGCATCGTACTGGTGGCGCGTCTGTGCCCTCCAGAGAGGTCAAACAATCAGGTTCCCGTATTGAACCCGACGAATTAGCATCTATATGCCGAACACATGATAAAAAAGGCTTAGAACTTAATGGAGGAGTAGAAGGACTTGCAAAAGCAGTTAATGTGTCATTGAAAGACGGTGTTAATTCAAGTGATGTTCCTAATAGACAAAATATCTTCGGTTCTAACCGCTTTGCAGAGAAGCCCTCAAGAGGATTCTGGATGTTCGTTTGGGACGCAATGCAAGACTTGACTCTCATTATCCTTTTGTTATGTGCTGTTGTTTCAATAGGAGTTGGAATCCCAACTGAAGGTTGGCCAAAAGGTGTATATGATGGAGTAGGAATCGCACTCTCTATTCTCTTAGTTGTCCTTGTCACTTCGATGAGTGACTATAAACAGAGTTTGCAATTTAAAGATTTGGAGAATGAGAAGAAAAATGTCACCATCCAGGTTACTAGAGATGGCAACAGACAAAAGATTTCAGTCTATGAATTAGTGGTAGGAGATATAGTTCATTTATCAATAGGAGACATAGTTCCTGCAGATGGATTATTCATATCAGGTTACAGCTTATTAATTGATGAATCAAGCTTATCAGGGGAGAGTGAGGCTGTTCACGTAGACCAAAATACCCCTTTCCTTCTAGCTGGGACCAAAGTACAAGATGGGTCTGCTAAAATGCTAGTGACTTCTGTTGGTATGAGAACTGAATGGGGAAGATTGATGGATACTCTGAACGAAGTTGGAGACGATGAGACACCATTGCAGGTGAAATTAAATGGGGTTGCCACCATAATTGGCAAGATTGGGTTGGGTTTTGCCCTGATGACATTTTTGGTCCTAACTGGAAGGTTTTTGGTGCGTAAAATAGTTCATCATGAGATTACTCAATGGTCCTTAAATGACGCATCTGAGCTTCTCAATTTCTTTGCCACTGCTGTGATTATAATAGTTGTGGCAGTTCCAGAGGGACTTCCTTTGGCTGTGACACTAAGCCTTGCTTTTGCTATGAAGAAATTAATGAACGATAAGGCACTTGTCAGGCACCTCTCTGCTTGCGAGACCATGGGCTCTGCTGGTTGTATTTGCACTGACAAAACTGGAACTTTGACAACAAATCACATGGTTGTGAATAAATTATGGATTTGCGGACAAACTAAGGAGATTAAAAACAATAATAACAGTGAGATAAAGTCAACGATTTCTGAGAAAATGTTTGACCTCTTTTTGCAGTCAATATTTCAGAATACTGGAGCAGAGGTGGTCAGAGGTGAAAATGGGAAGAACAATAAGGTTATGGGTACTCCGACAGAGAAGGCATTGATAGAATTTGGGTTGCTTGCTGGAGGTGAACCTGAGGTTTATAATGACAAGTATAAGATCTTAACAATCGAGCCATTTAATTCAAACAGAAAAAGAATGTCGGTGCTTGTGGCTCTACCTTGTGATGCCAATAATAGGTCCAGAGCATTTTGTAAAGGAGCATCAGAAATAGTTCTGGAAATGTGCGACAAACTTGTGGATTCAAATGGAGAAGTGGTTCGTCTGTTCGAAGAACAGAGAAAGAGCATCACAAAAGTAATCAATGATTTTGCTTCTGAAGCTCTAAGAACTCTCTCTATCGCCTATAAAGATGTCGAAAATTCTGGGGGGGATAAAATTCCTGAGGAGAATTTTACGCTGTTGGCTGTTGTTGGGATCAAGGATCCTGTGAGACCTGGAGTGAAAGAAGCTGTAGAGACTTGTAAAGCAGCTGGTATTTCTGTAAAGATGGTGACTGGTGATAACATCATTACTGCTAAAGCAATAGCTAAAGAGTGTGGGATATTGACAGATGGGATTGCCATTGAAGGACCCGAATTTCGTAACAAGACACAGCAAGAAATGCAGGAGATAATACCAAAAATACAGGTTATGGCCCGATCTTTGCCTCTGGACAAGCACACTTTAGTGACGCATTTGAGGAAACACTTAAATGAAGTTGTTGCAGTAACTGGTGATGGTACCAATGATGCCCCGGCACTGCGTGAGGCAGATATTGGCCTCGCTATGGGCATAGCAGGAACAGAGGTGGCAAAAGAAAATGCGGATGTGATTGTAATGGATGATAACTTCACAACCATACTGAACGTTGCCAGATGGGGCCGTTCTGTGTACGTCAATGTTCAAAAGTTTGTTCAATTCCAATTAACAGTTAATGTTGTGGCTCTCATCCTCAACTTTGTTTCCGCCTGTGTCTCAGGTTCTGCTCCTCTTACCGCTGTTCAAATGCTTTGGGTAAACATGATCATGGACACTCTTGGTGCTTTGGCTCTTGCCACTGAACCTCCACATGAGGGGCTCATGAAAAGACCACCCATCGGAAGGAATGTCAATCTCATTACCGGCATCATGTGGAGGAATATAATTGGTCAGAGCCTCTATCAGATAGCTGTCCTCTTGGTTCTCAAATTTCGTGGCAAACAGATTTTGAATCTTAACGGTCCTGATGCAACCCATGTTCTTAATACTTTCATATTCAACGTCTTCGTATTTTGCCAGGTATTCAATGAGATAAACAGCCGTGACATGGAGAAGATCAATGTTTTCCGGGGCATGTTCAGCAGTTGGATCTTCCTTGCAGTTTTGGCCTCAACAATATGTTTCCAAGCCATACTTGTTGAATTTCTGGGTACTTTTGCTCAAACAGTACCACTAAGCTGGGGCCTATGGCTAGCCAGTGTCCTAATTGGTGCAGTGGGCTTACCCTTAGCTGCCATTGTCAAATGCATTCCCCTTTCAAAGCCTGATTTCGCCCATCATCATGATGATTACGTACCCATCCCCAGTGGCCCAGATCTGGCATAA 3138 0.4337 MEQYLRDNFHVSSKRSSDAALRRWRSAVSVVKNPRRRFRMVADLAKRAHAEQKRKNLQEKVRLALYVQKAALQFIDEFNFSSHTAGHRTGGASVPSREVKQSGSRIEPDELASICRTHDKKGLELNGGVEGLAKAVNVSLKDGVNSSDVPNRQNIFGSNRFAEKPSRGFWMFVWDAMQDLTLIILLLCAVVSIGVGIPTEGWPKGVYDGVGIALSILLVVLVTSMSDYKQSLQFKDLENEKKNVTIQVTRDGNRQKISVYELVVGDIVHLSIGDIVPADGLFISGYSLLIDESSLSGESEAVHVDQNTPFLLAGTKVQDGSAKMLVTSVGMRTEWGRLMDTLNEVGDDETPLQVKLNGVATIIGKIGLGFALMTFLVLTGRFLVRKIVHHEITQWSLNDASELLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGCICTDKTGTLTTNHMVVNKLWICGQTKEIKNNNNSEIKSTISEKMFDLFLQSIFQNTGAEVVRGENGKNNKVMGTPTEKALIEFGLLAGGEPEVYNDKYKILTIEPFNSNRKRMSVLVALPCDANNRSRAFCKGASEIVLEMCDKLVDSNGEVVRLFEEQRKSITKVINDFASEALRTLSIAYKDVENSGGDKIPEENFTLLAVVGIKDPVRPGVKEAVETCKAAGISVKMVTGDNIITAKAIAKECGILTDGIAIEGPEFRNKTQQEMQEIIPKIQVMARSLPLDKHTLVTHLRKHLNEVVAVTGDGTNDAPALREADIGLAMGIAGTEVAKENADVIVMDDNFTTILNVARWGRSVYVNVQKFVQFQLTVNVVALILNFVSACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHEGLMKRPPIGRNVNLITGIMWRNIIGQSLYQIAVLLVLKFRGKQILNLNGPDATHVLNTFIFNVFVFCQVFNEINSRDMEKINVFRGMFSSWIFLAVLASTICFQAILVEFLGTFAQTVPLSWGLWLASVLIGAVGLPLAAIVKCIPLSKPDFAHHHDDYVPIPSGPDLA 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1156 1045 Pfam haloacid dehalogenase-like hydrolase 458 776 - -
Mibi01g1156 1045 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 120 1023 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mibi01g1156 1045 SUPERFAMILY Calcium ATPase, transmembrane domain M 126 1023 IPR023298 -
Mibi01g1156 1045 Gene3D - 16 76 - -
Mibi01g1156 1045 SMART Cation_ATPase_N_a_2 123 197 IPR004014 -
Mibi01g1156 1045 FunFam Calcium-transporting ATPase 16 76 - -
Mibi01g1156 1045 Gene3D - 470 667 IPR023299 GO:0000166
Mibi01g1156 1045 Gene3D - 175 1020 - -
Mibi01g1156 1045 PANTHER CATION TRANSPORTING ATPASE 96 1023 - -
Mibi01g1156 1045 Gene3D - 143 343 - -
Mibi01g1156 1045 SFLD p-type atpase 442 814 IPR044492 -
Mibi01g1156 1045 SFLD C1.7: P-type atpase like 442 814 - -
Mibi01g1156 1045 PRINTS H+-transporting ATPase (proton pump) signature 621 639 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi01g1156 1045 PRINTS H+-transporting ATPase (proton pump) signature 762 778 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi01g1156 1045 PRINTS H+-transporting ATPase (proton pump) signature 794 819 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi01g1156 1045 CDD P-type_ATPase_Ca_PMCA-like 151 895 - -
Mibi01g1156 1045 ProSitePatterns E1-E2 ATPases phosphorylation site. 462 468 IPR018303 -
Mibi01g1156 1045 SUPERFAMILY Calcium ATPase, transduction domain A 244 341 IPR008250 -
Mibi01g1156 1045 SUPERFAMILY HAD-like 459 867 IPR036412 -
Mibi01g1156 1045 Pfam Cation transporting ATPase, C-terminus 847 1020 IPR006068 -
Mibi01g1156 1045 FunFam Calcium-transporting ATPase 470 667 - -
Mibi01g1156 1045 FunFam Calcium-transporting ATPase 660 807 - -
Mibi01g1156 1045 FunFam Calcium-transporting ATPase 779 1025 - -
Mibi01g1156 1045 Pfam Cation transporter/ATPase, N-terminus 127 192 IPR004014 -
Mibi01g1156 1045 PRINTS P-type cation-transporting ATPase superfamily signature 460 474 - -
Mibi01g1156 1045 PRINTS P-type cation-transporting ATPase superfamily signature 762 781 - -
Mibi01g1156 1045 PRINTS P-type cation-transporting ATPase superfamily signature 786 798 - -
Mibi01g1156 1045 PRINTS P-type cation-transporting ATPase superfamily signature 660 671 - -
Mibi01g1156 1045 PRINTS P-type cation-transporting ATPase superfamily signature 682 692 - -
Mibi01g1156 1045 PRINTS P-type cation-transporting ATPase superfamily signature 291 305 - -
Mibi01g1156 1045 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 466 672 IPR023299 GO:0000166
Mibi01g1156 1045 Pfam E1-E2 ATPase 245 438 - -
Mibi01g1156 1045 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 557 708 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi01g1156 1045 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 212 483 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi01g1156 1045 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 727 850 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi01g1156 1045 Gene3D - 457 807 IPR023214 -
Mibi01g1156 1045 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Mibi01g1156 1045 FunFam Calcium-transporting ATPase 222 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1156 Mibi-ChrMibi01 14919765 14926678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1156 57 1042 Primary Pumps ATPases AT3G57330 67.477 0.0 1355