Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1148 ATGGGTTACTTCTCTTGCAGTGCTGAATCTGCCGTTTCAACCTCCAATTCTGCATCCCCATCTTCCTCTAAACCCTCCTCTTCTGATAAACCCATAAAGATCCAACATTTCGACTACAGTGACCTCGAAGCCGCCACTAATGGCTTCTCCGACAGAAAGCTCCTAGGCAAAGGCAGCCATGGCTATGTCTACAAAGCCGTCCTTCGAGGCCGTCCCGTCGCCGTCAAGAGACCTTCCAGAGCTCACGGCGCCGTTATTCGACGACCCACTTCGTTATCTTCTTCATCCACACCGGAGATTACAAACGAGGTCGACAACGAGATCGACATCTTGTCCAAAATTCAGAGCCCAAGATTGGTCAATTTGGTGGGTTTCACTAACGATTCCAAAGATAGACTTTTGGTTGTGGAGTTCATGAGTAATGGAACTCTATATGATGTTCTTCATTCTTCTCCACGGCCACCCAATTGGGGTCGGAGAATTCGATTGGCTTTGCAAACTGCTAAGGCCATTGATACCCTTCATTCCTCAACCCCACCTGTAATTCATAGGGATATTAAATCTGCGAATGTTTTGATAGATCGAAACTTTAATGCTCGATTGGGAGATTTTGGGTTAGCCCTGCGGGGACATGAAGATGATTATAGACTTAGGTCTACTCCTCCAGCAGGTACTATGGGGTATCTTGATCCTTGTTATGTGACTCCTGATAACTTGAGTACGAAAACTGATGTGTTTAGTTTTGGGATTTTGCTGTTAGAGATAATTAGTGGTAGAAAAGCCATTGATATTACATATTCACCACCTTCCATTGTGGATTGGGCTATTCCTCTCATAAAGAAAGGGAAGTTATTGGCTGTTTATGATCCGAAGATATCACCTCCTAAGGATCCAGTTGTTAGGAAGCAATTGGCTGTGATTGCTGCGAAATGTGTTAGGTCTTGTAGAGAAAGGAGGCCTTCAATGAAGGAGATAAATGCTTGGCTTACTGGGTTGTGTAAACTGGTGCCCCTTCATTCTTGGAATGGTTTTAACAATCCTTGTATGATGATCGAGACTGTGGGACGCCCAATTGAAGCCAGAAATGCCCATGTGAGTCCAAGACAAGAAGGTGGTTTAGAAGGTGGAAATTTTGAAGCTTTAGATGCTAGATTGTCTAAATCTGCGCATAGATATTCAAGGAGAGTGTATTCTGATCTGGGGTTCAGAAGCAACTTGATGGAACTTATGAATAACCCTGAGGAACAAGATAAATCTGGTTATAGAGTTTCCAGCTCAAGATTTGGTAGTGGAAGGTATTTCACAAAAAGCTTAAATCTCTACAGGGCATGTGGTACAGATAAAGACGCTTTTGGTTTGAGTGAAGGCCAAATTGTTGGCGGTGAAGGGAGCTCAAAATTTCGTCCAAAACAAGAAGCTAATTCTGGACCAGATTTGAATTCTCAGGAAGCTGAAGCTAATCCTAGTTAA 1470 0.434 MGYFSCSAESAVSTSNSASPSSSKPSSSDKPIKIQHFDYSDLEAATNGFSDRKLLGKGSHGYVYKAVLRGRPVAVKRPSRAHGAVIRRPTSLSSSSTPEITNEVDNEIDILSKIQSPRLVNLVGFTNDSKDRLLVVEFMSNGTLYDVLHSSPRPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALRGHEDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDITYSPPSIVDWAIPLIKKGKLLAVYDPKISPPKDPVVRKQLAVIAAKCVRSCRERRPSMKEINAWLTGLCKLVPLHSWNGFNNPCMMIETVGRPIEARNAHVSPRQEGGLEGGNFEALDARLSKSAHRYSRRVYSDLGFRSNLMELMNNPEEQDKSGYRVSSSRFGSGRYFTKSLNLYRACGTDKDAFGLSEGQIVGGEGSSKFRPKQEANSGPDLNSQEAEANPS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1148 489 MobiDBLite consensus disorder prediction 452 489 - -
Mibi01g1148 489 Pfam Protein tyrosine and serine/threonine kinase 53 326 IPR001245 GO:0004672|GO:0006468
Mibi01g1148 489 SMART serkin_6 49 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1148 489 SUPERFAMILY Protein kinase-like (PK-like) 22 329 IPR011009 -
Mibi01g1148 489 FunFam Serine/threonine-protein kinase-like protein 139 342 - -
Mibi01g1148 489 Gene3D Phosphorylase Kinase; domain 1 21 138 - -
Mibi01g1148 489 MobiDBLite consensus disorder prediction 7 30 - -
Mibi01g1148 489 ProSitePatterns Protein kinases ATP-binding region signature. 55 76 IPR017441 GO:0005524
Mibi01g1148 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Mibi01g1148 489 FunFam Serine/threonine-protein kinase-like protein At1g28390 17 138 - -
Mibi01g1148 489 PANTHER OS01G0253100 PROTEIN 19 331 IPR045271 -
Mibi01g1148 489 MobiDBLite consensus disorder prediction 1 32 - -
Mibi01g1148 489 MobiDBLite consensus disorder prediction 79 99 - -
Mibi01g1148 489 ProSiteProfiles Protein kinase domain profile. 49 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g1148 489 Gene3D Transferase(Phosphotransferase) domain 1 139 336 - -
Mibi01g1148 489 MobiDBLite consensus disorder prediction 468 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1148 Mibi-ChrMibi01 14836513 14837982 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1148 37 329 Receptor kinase-like Gene Family AT3G59420 44.147 2.43e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mibi01g1148 PK_Tyr_Ser-Thr 4.8e-37 CL0016