Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1138 ATGGCCAGAGAAACTTGGTGGCTCCTTTTCCTTCTCTCTACACTTTTCTTTGTGGATGAGATCCATGGAGGCAGAAGCCAAGATCAAGCTCTCAGGAAACTGAACAAGTCCAAGTTCAGAGGAGGCACCATCGACAGAAGTAGTGAAACAATCTTGGAGGTTGATAATGAGGCTGTGTTTGGTGGAGACTATAATGATGAAAAGTCTCGTTACTATTATCCTCAACAAGGTTTGAAAGAGAAAGATAGGATTGATAAACTTCCAGGACAGCCTCAAGGTGTGAGTTTCTCTCAGTACGGAGGATATGTCACTGTAGATAAAATTGCAGGACGAGCTTTTTATTATTACTTTGTTAAAGCTCAACAATCTCATAGCCATAAGTTGCCTCTTCTTCTCTGGCTTAATGGAGGACCTGGATGCTCATCTCTTGGATATGGGGCAATGCAAGAGCTGGGACCATTTCGAGTGAACAGTGATGGAAAAACACTGCAAACAAACAAATACTCATGGAACTATGCTGCAAATGTGTTATTTTTAGAATCACCAGCAGGAGTGGGATTTTCATACTCAAACAAGACTTCAGATTATGACAATAACGGGGATAGAAGGACTTCTACAGACAATTATGTGTTTCTAAGGAACTGGTTGGAGAGATTTGCAGAGTATAAGACTTCAGAATTGTACATAGCAGGGGAGAGCTATGCAGGCCATTATGTTCCTCAGCTTGCTCATACCATTCTCCACCATAACAACCACCCCAACTCCTCCTTCCTCATCAACCTCAAAGGAATCTTAATAGGGAATGCAGTGTTAAATGATGAAACAGACAACAGAGGAAGATGGGAATTCCTAGCGAGCCATGCCATAATATCAGACAAAGCAGCTCATGCTGTCACCAAATTGTGTGATTATTTGTCAGACTCAAAGCCTTCAGCATCTTCTTCATCATCAATTGATAATGAATGTAGAGAAGCATCAGATGAAATAGAGGCAGACACTGGCTCCATCAATATATACAACATCTATGCCCCTCAATGCCATGATTCTAGCCTCACTGCCCTTCCTAAGCCCCCTTCTAAAGTGGCAGATCCTTGTATTGATGATTATGTGTATGAATACATGAACCGGGTTGAGGTGCAAGAGGTATTGCATGCGAATGTCACAAAGTTGAGTCATGATTGGGAACTATGCAGCGATGTCATTGCTAAGTGGGATGATAGCCCTTCCACTGTTCTTCCTCTTCTGAAAGAGTTTCTCAATCACAGCCTTCGTGTTTGGATTTTTAGTGGTGACTTTGATGGAATGGTGCCGGTTACTGCAACAAAGTATTCCCTTGACAAGTTAAATCTCACTCCTAAGGCTATGTGGAATCCTTGGTTCGTCAATGGAGAGGTAGGAGGATACACACAAGTGTACAAGGGAGGATTGACGTTTGCAACAGTGAGAGGAGCAGGGCATGAAGTGCCAAGCTATCAGCCAGCAAGAGCCCTTTCTTTGGTCAATCACTTCTTAAAAGGCATCCCTCTTCCTAATACCACAACATCCACAAACACCTATTTCTAA 1563 0.4255 MARETWWLLFLLSTLFFVDEIHGGRSQDQALRKLNKSKFRGGTIDRSSETILEVDNEAVFGGDYNDEKSRYYYPQQGLKEKDRIDKLPGQPQGVSFSQYGGYVTVDKIAGRAFYYYFVKAQQSHSHKLPLLLWLNGGPGCSSLGYGAMQELGPFRVNSDGKTLQTNKYSWNYAANVLFLESPAGVGFSYSNKTSDYDNNGDRRTSTDNYVFLRNWLERFAEYKTSELYIAGESYAGHYVPQLAHTILHHNNHPNSSFLINLKGILIGNAVLNDETDNRGRWEFLASHAIISDKAAHAVTKLCDYLSDSKPSASSSSSIDNECREASDEIEADTGSINIYNIYAPQCHDSSLTALPKPPSKVADPCIDDYVYEYMNRVEVQEVLHANVTKLSHDWELCSDVIAKWDDSPSTVLPLLKEFLNHSLRVWIFSGDFDGMVPVTATKYSLDKLNLTPKAMWNPWFVNGEVGGYTQVYKGGLTFATVRGAGHEVPSYQPARALSLVNHFLKGIPLPNTTTSTNTYF 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1138 520 FunFam Carboxypeptidase 411 506 - -
Mibi01g1138 520 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 189 IPR001563 GO:0004185|GO:0006508
Mibi01g1138 520 PRINTS Carboxypeptidase C serine protease (S10) family signature 215 240 IPR001563 GO:0004185|GO:0006508
Mibi01g1138 520 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 178 IPR001563 GO:0004185|GO:0006508
Mibi01g1138 520 PRINTS Carboxypeptidase C serine protease (S10) family signature 476 489 IPR001563 GO:0004185|GO:0006508
Mibi01g1138 520 FunFam Carboxypeptidase 363 509 - -
Mibi01g1138 520 Gene3D alpha/beta hydrolase 78 348 IPR029058 -
Mibi01g1138 520 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 84 493 IPR001563 GO:0004185|GO:0006508
Mibi01g1138 520 SUPERFAMILY alpha/beta-Hydrolases 84 510 IPR029058 -
Mibi01g1138 520 ProSitePatterns Serine carboxypeptidases, serine active site. 229 236 IPR018202 GO:0004185
Mibi01g1138 520 Gene3D - 411 506 - -
Mibi01g1138 520 Pfam Serine carboxypeptidase 88 506 IPR001563 GO:0004185|GO:0006508
Mibi01g1138 520 Gene3D - 365 402 - -
Mibi01g1138 520 ProSitePatterns Serine carboxypeptidases, histidine active site. 476 493 IPR033124 GO:0004185
Mibi01g1138 520 FunFam Carboxypeptidase 77 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1138 Mibi-ChrMibi01 14711130 14714364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1138 373 509 Calmodulin-binding Proteins AT2G22960 31.387 3.50e-15 72.0