LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi01g1083	ATGATTCAAGCCCAAAAACATAACCCTGTGTCTTTTCTTCTGCAACTCCGATCAGCGATTCTCTTTCTTCGTTTCGGTGGCATCACGGCGTTAAGAGAAAGCTTCGAACTTTGTAAGTGGATTATTTCCATATTCTCATGCTCTCTATTGGCAATGGGAAAGAACGAGTTTCTTACACCAAAGGCTATAGCTAATCGAATCAAAGCAAAGGGGCTGCAGAAGCTTCGGTGGTACTGCCAGATGTGTCAGAAACAATGTCGAGATGAGAATGGGTTCAAGTGTCATTGCATGAATGAAAGCCACCAGCGTCAAATGCAAATCTTTGGACAAAACCAAAATCGAATAATTGAGGGCTACTGTGAGGAGTTTGAGAACACCTTTCTTGAGCACATGAAGCGCAGCCACCGATTCAGTCGTATTGCTGCAACAGTAGTTTACAATGAATACATTAGTGACATACATCACATTCATATGAATTCCACACGATGGCTTACACTTACTGAGTTTGTCAAGTATTTGGGTCGTACCGGAAAGTGTAAGGTTGAAGAAACAACCAAGGGTTGGTTTATCACCTATATTGATAGGGATTCTGAGACTCTTTTTAAAGAGAGGATGAAGAATAAGAGAATAAAGTCTGACATGGCAGAAGAAGAGAAGCAAGAGAAGCAGATACAGAAACAAATAGAAAAGGTTGAGCAGTTGCTGCAGCCATCTGCCTCTGGATCTGATCAAACTTCAGAGGCTGAACTTCCTAGGGAGTTTAAAGTGGAAGATGGAGTTAAGATTGGGTTTTCTCTTGGTTCATCTGCAAAATCTTTAACCAAGGAAAAAAGGGAGGGACCAAAGGTAGTGTTTGATGAGGGCGAGGATGCCATAAAGGAAGAAAGGAAACCTGGAGGCTTTTTGAAGAGGAAAGAAAATGGTGGTGGAAAATCAACATTAGATGAATTGATGAGGGAAGATGAGAAGAAAAGGGAGAAGATTAGTAGAAAGGATTACTGGTTGCATGAGGGAATTGTTGTTAAGGTTATGAGCAAAGTTTTGGCTGATAAAGGGTATTACAAGCAAAAAGGTGTTGTGTTAAAGGTGATTGATAAGTATGTTGGGGAAATAGAGATGCTTGAAAGCAAGCATGTGCTCAGAGTTGATCAAGCAGGGCTGGAAACTGTAATCCCTCAAATTGGTGGTCTTGTCAAGATTGTAAATGGAGCTTATGGCGGATCTACAGCGAGACTGTTAGGGGTTGATACTGATCGCTTTTGTGCCAAGGTGCAGATAGAGAAAGGTCCTTACGATGGTAGAGTTCTCAAGGCAATGGAATATGAGGATATTTGCAAATTAGCCTAG	1347	0.4135	MIQAQKHNPVSFLLQLRSAILFLRFGGITALRESFELCKWIISIFSCSLLAMGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMNESHQRQMQIFGQNQNRIIEGYCEEFENTFLEHMKRSHRFSRIAATVVYNEYISDIHHIHMNSTRWLTLTEFVKYLGRTGKCKVEETTKGWFITYIDRDSETLFKERMKNKRIKSDMAEEEKQEKQIQKQIEKVEQLLQPSASGSDQTSEAELPREFKVEDGVKIGFSLGSSAKSLTKEKREGPKVVFDEGEDAIKEERKPGGFLKRKENGGGKSTLDELMREDEKKREKISRKDYWLHEGIVVKVMSKVLADKGYYKQKGVVLKVIDKYVGEIEMLESKHVLRVDQAGLETVIPQIGGLVKIVNGAYGGSTARLLGVDTDRFCAKVQIEKGPYDGRVLKAMEYEDICKLA	448

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi01g1083	448	Gene3D	-	338	391	-	-
	Mibi01g1083	448	FunFam	DNA/RNA-binding protein KIN17, putative	392	448	-	-
	Mibi01g1083	448	Coils	Coil	205	234	-	-
	Mibi01g1083	448	SMART	Kin17_mid_2	103	229	IPR019447	-
	Mibi01g1083	448	Gene3D	-	392	448	IPR014722	-
	Mibi01g1083	448	Gene3D	-	111	211	IPR038254	-
	Mibi01g1083	448	CDD	KOW_KIN17	394	447	IPR041995	-
	Mibi01g1083	448	FunFam	DNA/RNA-binding protein KIN17, putative	112	211	-	-
	Mibi01g1083	448	PANTHER	KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG	52	448	IPR037321	-
	Mibi01g1083	448	Pfam	KN17 SH3-like C-terminal domain	330	383	IPR041330	-
	Mibi01g1083	448	MobiDBLite	consensus disorder prediction	295	315	-	-
	Mibi01g1083	448	FunFam	DNA/RNA-binding protein kin17-like	338	391	-	-
	Mibi01g1083	448	Pfam	Domain of Kin17 curved DNA-binding protein	103	228	IPR019447	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi01g1083	Mibi-ChrMibi01	14240324	14242822	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi01g1083	52	448	C2H2 Transcription Factor Family	AT1G55460	70.146	0.0	564