Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1069 ATGGGGAGGGACAAGAACAGTAATAGTAGTAAGAACAACAACAACAACAATGTTGTGAAACTAAGGAAAGGGTTGTGGTCACCGGAGGAAGATGAGAAGCTGATAAGGTACATGTTGACCAATGGACAAGGTTGCTGGAGTGACATTGCCAGAAATGCTGGACTCCTTCGTTGTGGCAAAAGTTGTCGCCTTCGTTGGATTAATTATCTCAGACCTGACCTAAAGAGAGGTGCTTTTTCCCTCCATGAAGAACAACTCATCCTTCATTTCCATTCCATTCTTGGCAATAGGTGGTCTCAGATAGCAGCACGGCTTCCAGGAAGAACAGACAATGAGATTAAGAATTTCTGGAATTCAACTTTGAAGAAAAGGATGAAAAACAACACTTCTACTTGTACTACTACAGCTACCACTACAACTTCCACTGCTACTCCTTCACCAAACAACAGTACGGACTCATCTTCAAATCATCATACCCTTCTAAATGGAATCACCACCACCCATACCTCCTCCTCCATGCCCTTCATCAACATGACAATGTGCATGGACTCATCACCTTCATCACTATCATCATCTTCATCAGCGTCCGTACAATCCATGCAAGCCGCCGCCACAACTTTTGGTGGTGATGACCACCATTTAATGGAGTATCCCTTTTCCATGCTGAATAATAATAACAGTAATATTCCTTATGACATGATGCCTGCATGCTTAGCCCAAGTTGGTGGTAGTGGTGGTGGAATGGTGCAGGAGGATGGGTTTTATGGAGATGATTATAATAATGGGGTGGTGTTAGAGGGAGAAGATAGTAAAATATTGGGATTAGAAGAAAGAGACATGTGTCTTCCTCCTCTAGAGAGTAGAAGTATGGAAGGGAGGTATAATAGTAGTACTAGAAGTGTTGTTGTTCCTATTGATGTGAGAAGTAGTCATGTCATCAACAACAACTACCATTTTAATAATGGTTGCTTCAATAACACTCATCAGCATCATCATCATCAGGACTTGGTTGGGTTTGGGAATAATAATAATAATAATAATGGGCAATTAGGGGAAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTTTGATGCAAGATATATCCTCTTTTCCTTTCCTTGATTTCCAAGTTGAATAA 1140 0.4105 MGRDKNSNSSKNNNNNNVVKLRKGLWSPEEDEKLIRYMLTNGQGCWSDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSLHEEQLILHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRMKNNTSTCTTTATTTTSTATPSPNNSTDSSSNHHTLLNGITTTHTSSSMPFINMTMCMDSSPSSLSSSSSASVQSMQAAATTFGGDDHHLMEYPFSMLNNNNSNIPYDMMPACLAQVGGSGGGMVQEDGFYGDDYNNGVVLEGEDSKILGLEERDMCLPPLESRSMEGRYNSSTRSVVVPIDVRSSHVINNNYHFNNGCFNNTHQHHHHQDLVGFGNNNNNNNGQLGENLRMGEWDLEGLMQDISSFPFLDFQVE 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1069 379 SMART sant 22 72 IPR001005 -
Mibi01g1069 379 SMART sant 75 123 IPR001005 -
Mibi01g1069 379 MobiDBLite consensus disorder prediction 128 156 - -
Mibi01g1069 379 CDD SANT 26 70 IPR001005 -
Mibi01g1069 379 Gene3D - 77 149 - -
Mibi01g1069 379 Gene3D - 20 76 - -
Mibi01g1069 379 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Mibi01g1069 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 70 IPR017930 -
Mibi01g1069 379 MobiDBLite consensus disorder prediction 1 20 - -
Mibi01g1069 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 125 IPR017930 -
Mibi01g1069 379 PANTHER MYB DOMAIN PROTEIN 55 16 289 - -
Mibi01g1069 379 CDD SANT 78 121 IPR001005 -
Mibi01g1069 379 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Mibi01g1069 379 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
Mibi01g1069 379 FunFam MYB transcription factor 20 76 - -
Mibi01g1069 379 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Mibi01g1069 379 SUPERFAMILY Homeodomain-like 21 117 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1069 Mibi-ChrMibi01 14008326 14011243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1069 3 379 MYB Transcription Factor Family AT3G08500 43.603 1.31e-78 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g1069 Myb_DNA-binding 9.3e-13 CL0123